RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 RAB14P61106 215 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 GRK1Q15835 563 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 TPRXLQ17RH7 258 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 KRTAP13-4Q3LI77 160 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 C10orf126Q8N4M7 172 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 ANKRD7Q92527 254 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 ERMAPQ96PL5 475 aaPredicted RBP1.8□□□□□ -2.12
SMC4-218ENST00000486711 KRTAP4-1Q9BYQ7 146 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 DCCP43146 1447 aa1.8□□□□□ -2.12
SMC4-218ENST00000486711 TRAV7A0A075B6U4 112 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 HMSDA8MTL9 139 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 EEF1E1-BLOC1S5C9J1V9 151 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 LEPROTO15243 131 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 NOS1APO75052 506 aaPredicted RBP1.79□□□□□ -2.12
SMC4-218ENST00000486711 IFNA16P05015 189 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 MSMBP08118 114 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 OR2F1Q13607 317 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 TMEM42Q69YG0 159 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 DCXRQ7Z4W1 244 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 SLC35B4Q969S0 331 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 CCDC42Q96M95 316 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 VCX3BQ9H321 246 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 V9GYY5 206 aaPredicted RBP1.79□□□□□ -2.12
SMC4-218ENST00000486711 SLX4Q8IY92 1834 aa1.79□□□□□ -2.12
SMC4-218ENST00000486711 REREQ9P2R6 1566 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 TGIF2-C20orf24A0A0A6YYL0 155 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 IGHV1-18A0A0C4DH31 117 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 ZNF705FA8MVS1 300 aaPredicted RBP1.78□□□□□ -2.12
SMC4-218ENST00000486711 INMT-MINDY4F8WBC2 141 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 PSMD12O00232 456 aaPredicted RBP1.78□□□□□ -2.12
SMC4-218ENST00000486711 CD79AP11912 226 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 RPP25LQ8N5L8 163 aaKnown RBP1.78□□□□□ -2.12
SMC4-218ENST00000486711 ZNF676Q8N7Q3 588 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 OR1M1Q8NGA1 313 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 OR8J2Q8NGG1 315 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 OR52E6Q96RD3 313 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 DOK5Q9P104 306 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 FUT9Q9Y231 359 aa1.78□□□□□ -2.12
SMC4-218ENST00000486711 ICE1Q9Y2F5 2266 aa1.78□□□□□ -2.13
SMC4-218ENST00000486711 NAV1Q8NEY1 1877 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 SNAPC4Q5SXM2 1469 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 CACNA1GO43497 2377 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 TRBV20OR9-2A0A075B6H5 130 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 GGT3PA6NGU5 568 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 PPBPP02775 128 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 SERPINA7P05543 415 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 OMPP47874 163 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 RGS21Q2M5E4 152 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 TMEM86AQ8N2M4 240 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 PPP1R14BQ96C90 147 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 PARD6GQ9BYG4 376 aaPredicted RBP1.77□□□□□ -2.13
SMC4-218ENST00000486711 CHST6Q9GZX3 395 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 VPS29Q9UBQ0 182 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 TIMM22Q9Y584 194 aa1.77□□□□□ -2.13
SMC4-218ENST00000486711 FLT4P35916 1363 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 MEIKINA0A087WXM9 373 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 E2F6O75461 281 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 PGLYRP1O75594 196 aaPredicted RBP1.76□□□□□ -2.13
SMC4-218ENST00000486711 RPP14O95059 124 aaKnown RBP1.76□□□□□ -2.13
SMC4-218ENST00000486711 C1QAP02745 245 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 SULT1A3P0DMM9 295 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 SULT1A4P0DMN0 295 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 FGF6P10767 208 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 CCL5P13501 91 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 HLA-DMBP28068 263 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 PSME3P61289 254 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 RPL18Q07020 188 aaKnown RBP1.76□□□□□ -2.13
SMC4-218ENST00000486711 TRAPPC5Q8IUR0 188 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 C1orf158Q8N1D5 194 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 DYNAPQ8N1N2 210 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 OR2T4Q8NH00 348 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 EFCAB1Q9HAE3 211 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 IL36BQ9NZH7 164 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 COL5A3P25940 1745 aaPredicted RBP1.76□□□□□ -2.13
SMC4-218ENST00000486711 BAHCC1Q9P281 2608 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 ARHGAP32A7KAX9 2087 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 MPDZO75970 2070 aa1.76□□□□□ -2.13
SMC4-218ENST00000486711 PLXNA3P51805 1871 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 MYO3BQ8WXR4 1341 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 TRGV2A0A075B6R0 118 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 A0A0J9YY10 115 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 A0A1B0GX78 115 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 IRGMA1A4Y4 181 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 SLC22A1O15245 554 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 C1QCP02747 245 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 PRM2P04554 102 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 DEFA4P12838 97 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 IFITM2Q01629 132 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 GUK1Q16774 197 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 TMEM155Q4W5P6 130 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 Q6ZS49 121 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 SLC36A1Q7Z2H8 476 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 COA5Q86WW8 74 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 C20orf196Q8IYI0 205 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 TMEM86BQ8N661 226 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 OR5B17Q8NGF7 314 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 DCUN1D1Q96GG9 259 aa1.75□□□□□ -2.13
SMC4-218ENST00000486711 ZNF625Q96I27 306 aaPredicted RBP1.75□□□□□ -2.13
SMC4-218ENST00000486711 COMMD5Q9GZQ3 224 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms