RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HSBP1O75506 76 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 CELA3BP08861 270 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 OR9G9P0C7N8 305 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 USF1P22415 310 aaPredicted RBP8.83□□□□□ -1
CCDC171-208ENST00000486641 CD27P26842 260 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 GNG3P63215 75 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 ARF1P84077 181 aaKnown RBP8.83□□□□□ -1
CCDC171-208ENST00000486641 CATR1Q13166 79 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 GP6Q9HCN6 339 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 TECRQ9NZ01 308 aaKnown RBP8.83□□□□□ -1
CCDC171-208ENST00000486641 IGHV1OR15-9A0A0B4J2B8 117 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 LINC00473A8K010 186 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 DNPH1O43598 174 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 NUDT3O95989 172 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 RAC2P15153 192 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 UBE2G1P62253 170 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 BVES-AS1Q5T3Y7 98 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 PRR27Q6MZM9 219 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 CLEC2AQ6UVW9 174 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 SPACA3Q8IXA5 215 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 ABHD3Q8WU67 409 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 SERTAD4Q9NUC0 356 aa8.83□□□□□ -1
CCDC171-208ENST00000486641 CHTOPQ9Y3Y2 248 aaKnown RBP8.83□□□□□ -1
CCDC171-208ENST00000486641 GAGE12BA1L429 117 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 ANKRD30BLA7E2S9 258 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 PRSS46E5RG02 174 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 SS18L1O75177 396 aaPredicted RBP8.82□□□□□ -1
CCDC171-208ENST00000486641 CA1P00915 261 aaPredicted RBP8.82□□□□□ -1
CCDC171-208ENST00000486641 AREGP15514 252 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 EN2P19622 333 aaPredicted RBP8.82□□□□□ -1
CCDC171-208ENST00000486641 SSTR5P35346 364 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 DUSP3P51452 185 aaPredicted RBP8.82□□□□□ -1
CCDC171-208ENST00000486641 PCOLCEQ15113 449 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 ASPHD1Q5U4P2 390 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 DEFB125Q8N687 156 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 OR10D3Q8NH80 312 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 R4GN57 208 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 WDR87Q6ZQQ6 2873 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 NCKAP5O14513 1909 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 MUC21A0A0G2JKD1 596 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 MUC21A0A140T8X8 626 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 IZUMO1RA6ND01 250 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 ISLRO14498 428 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 MT-CO2P00403 227 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 CA7P43166 264 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 FOXG1P55316 489 aaPredicted RBP8.82□□□□□ -1
CCDC171-208ENST00000486641 MUC21Q5SSG8 566 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
CCDC171-208ENST00000486641 ABHD12Q8N2K0 398 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 FAM168AQ92567 244 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 GALMQ96C23 342 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 PHF7Q9BWX1 381 aaPredicted RBP8.82□□□□□ -1
CCDC171-208ENST00000486641 PKIBQ9C010 78 aa8.82□□□□□ -1
CCDC171-208ENST00000486641 ZNF331Q9NQX6 463 aaPredicted RBP8.82□□□□□ -1
CCDC171-208ENST00000486641 IGLV2-8P01709 118 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 GATA2P23769 480 aaPredicted RBP8.81□□□□□ -1
CCDC171-208ENST00000486641 NPY1RP25929 384 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 TIGITQ495A1 244 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 SLC25A45Q8N413 288 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 IFI44Q8TCB0 444 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 TAAR6Q96RI8 345 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 SH2D2AQ9NP31 389 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 TNFRSF19Q9NS68 423 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 CLEC5AQ9NY25 188 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 KCNIP1Q9NZI2 227 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 RPH3ALQ9UNE2 315 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 MPC1Q9Y5U8 109 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 FREM1Q5H8C1 2179 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 A0A0G2JMM0 328 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 A0A1W2PPB8 328 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 KIR3DP1A8MWS1 328 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 C12orf77C9JDV5 145 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 K7ERU9 68 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 TOX4O94842 621 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 MGST1P10620 155 aaKnown RBP8.81□□□□□ -1
CCDC171-208ENST00000486641 CEBPDP49716 269 aaPredicted RBP8.81□□□□□ -1
CCDC171-208ENST00000486641 RIPPLY3P57055 190 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 TMPRSS3P57727 454 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 PSG9Q00887 426 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 GDF5OSQ5U4N7 250 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 RNASEKQ6P5S7 137 aaKnown RBP8.81□□□□□ -1
CCDC171-208ENST00000486641 MIR17HGQ75NE6 70 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 STPG3Q8N7X2 389 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 TMEM45BQ96B21 275 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 CDX2Q99626 313 aaPredicted RBP8.81□□□□□ -1
CCDC171-208ENST00000486641 MEGF9Q9H1U4 602 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 HEYLQ9NQ87 328 aaPredicted RBP8.81□□□□□ -1
CCDC171-208ENST00000486641 CLCF1Q9UBD9 225 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 IL19Q9UHD0 177 aa8.81□□□□□ -1
CCDC171-208ENST00000486641 LSM4Q9Y4Z0 139 aaKnown RBP8.81□□□□□ -1
CCDC171-208ENST00000486641 MED12LQ86YW9 2145 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 IGHV3-64DA0A0J9YX35 117 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 hDV102S1A0JD36 115 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 OR4C46A6NHA9 309 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 EPOPA6NHQ4 379 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 AHRRA9YTQ3 701 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 J3QT63 122 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 ACTL6BO94805 426 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 RFPL3SP0C7P2 107 aa8.8□□□□□ -1
CCDC171-208ENST00000486641 GPR6P46095 362 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms