RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 H3BP45 60 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 IFNL4K9M1U5 179 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 HAND1O96004 215 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 IAPPP10997 89 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 GLRXP35754 106 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 NDUFA6P56556 154 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 MEF2BQ02080 365 aaPredicted RBP7.45□□□□□ -1.22
COL12A1-208ENST00000486533 MSMPQ1L6U9 139 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 TMEM241Q24JQ0 296 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 SMIM21Q3B7S5 101 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 ACOT6Q3I5F7 207 aaPredicted RBP7.45□□□□□ -1.22
COL12A1-208ENST00000486533 SPANXN5Q5MJ07 72 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 NCR3LG1Q68D85 454 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 KCNIP4Q6PIL6 250 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 ODF3L1Q8IXM7 274 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 DRAM1Q8N682 238 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 ABHD14AQ9BUJ0 271 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 OR51B6Q9H340 312 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 MS4A5Q9H3V2 200 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 RPRMQ9NS64 109 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 TMEM160Q9NX00 188 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 GFOD1Q9NXC2 390 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 OR1A1Q9P1Q5 309 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 IL36RNQ9UBH0 155 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 MIOXQ9UGB7 285 aa7.45□□□□□ -1.22
COL12A1-208ENST00000486533 A0A0G2JRQ6 117 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 UBE2L5PA0A1B0GUS4 154 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 LYNX1G3V0Z9 82 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 SPINT2O43291 252 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 MPDU1O75352 247 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 ZNF737O75373 536 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 KBTBD11O94819 623 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 NXPH3O95157 252 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 VENTXO95231 258 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 TGFAP01135 160 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 IFNA10P01566 189 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 IGKV1-5P01602 117 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 ADH4P08319 380 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 LYNX1P0DP58 116 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 HNF1AP20823 631 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 KIR2DS2P43631 304 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 FAM90A2PQ658T7 463 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 LCN15Q6UWW0 184 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 IL17RELQ6ZVW7 336 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 H2BFWTQ7Z2G1 175 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 LRP11Q86VZ4 500 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 SSX3Q99909 188 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 RSG1Q9BU20 258 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 RBKSQ9H477 322 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 DOK5Q9P104 306 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 ZMAT5Q9UDW3 170 aaKnown RBP7.44□□□□□ -1.22
COL12A1-208ENST00000486533 PITPNC1Q9UKF7 332 aa7.44□□□□□ -1.22
COL12A1-208ENST00000486533 A0A1W2PPE3 182 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 LRRC30A6NM36 301 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 F6UZH7 168 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 H7BYZ3 331 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 SRD5A1P18405 259 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 FGF7P21781 194 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 SRP14P37108 136 aaKnown RBP7.43□□□□□ -1.22
COL12A1-208ENST00000486533 SELENOVP59797 346 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 ALKBH6Q3KRA9 238 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 FAM120AOSQ5T036 256 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 FAM90A1Q86YD7 464 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 FGFRL1Q8N441 504 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 OR10A7Q8NGE5 316 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 SPATA3Q8NHX4 192 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 ZNF488Q96MN9 340 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 OR4C12Q96R67 309 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 GGACTQ9BVM4 153 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 OR2D2Q9H210 308 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 ZNF665Q9H7R5 613 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 SRD5A3Q9H8P0 318 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 HES4Q9HCC6 221 aa7.43□□□□□ -1.22
COL12A1-208ENST00000486533 ZNF729A6NN14 1252 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-208ENST00000486533 PPP5D1E7EU14 171 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 TSTD3H0UI37 97 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 PDE6DO43924 150 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 RHBDL1O75783 438 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 IGKV1-39P01597 117 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 IGKV1D-39P04432 117 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 KLF3P57682 345 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-208ENST00000486533 FAM3BP58499 235 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-208ENST00000486533 ERVS71-1P61550 626 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 ERVK-16P61578 105 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 HTD2P86397 168 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 PAX5Q02548 391 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 BSXQ3C1V8 233 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 ZNF585BQ52M93 769 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 OR8G2PQ6IF36 304 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 PRR18Q8N4B5 295 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 OR10G9Q8NGN4 311 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 OR10G7Q8NGN6 311 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 DTD1Q8TEA8 209 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 TMEM158Q8WZ71 300 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 NEIL1Q96FI4 390 aaPredicted RBP7.42□□□□□ -1.22
COL12A1-208ENST00000486533 ACY3Q96HD9 319 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
COL12A1-208ENST00000486533 ADARB2-AS1A8MUL3 147 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms