RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 DPPA5A6NC42 116 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 OR2T8A6NH00 312 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 CGB1A6NKQ9 187 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 LINC00473A8K010 186 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 DHFRP00374 187 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 REG1AP05451 166 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 CD2P06729 351 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 RPL27AP46776 148 aaKnown RBP5.76□□□□□ -1.49
XRN1-212ENST00000486211 HAMPP81172 84 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 SYS1Q8N2H4 156 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 ACBD7Q8N6N7 88 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 C15orf53Q8NAA6 179 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 TMEM116Q8NCL8 245 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 OSR1Q8TAX0 266 aaPredicted RBP5.76□□□□□ -1.49
XRN1-212ENST00000486211 SETD6Q8TBK2 473 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 GPR148Q8TDV2 347 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 CHAC2Q8WUX2 184 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 CANT1Q8WVQ1 401 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 RFKQ969G6 155 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 NRBF2Q96F24 287 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 ATG101Q9BSB4 218 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 OR2D2Q9H210 308 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 CDIP1Q9H305 208 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 SMPD3Q9NY59 655 aaPredicted RBP5.76□□□□□ -1.49
XRN1-212ENST00000486211 PTTG2Q9NZH5 202 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 DKK2Q9UBU2 259 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 TRAV8-7A0A075B6U6 113 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 IGHV3-49A0A0A0MS15 119 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 HTN3P15516 51 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 DUTP33316 252 aaKnown RBP5.75□□□□□ -1.49
XRN1-212ENST00000486211 GTF2A1P52655 376 aaPredicted RBP5.75□□□□□ -1.49
XRN1-212ENST00000486211 DLK1P80370 383 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 OXA1LQ15070 435 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 AWAT2Q6E213 333 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 OR8J1Q8NGP2 316 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 BSCL2Q96G97 398 aaPredicted RBP5.75□□□□□ -1.49
XRN1-212ENST00000486211 NEDD4LQ96PU5 975 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 HDHD3Q9BSH5 251 aaPredicted RBP5.75□□□□□ -1.49
XRN1-212ENST00000486211 MS4A6AQ9H2W1 248 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 LINC00588Q9Y4M8 146 aa5.75□□□□□ -1.49
XRN1-212ENST00000486211 TRAV2A0A0B4J234 112 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 KNCNA6PVL3 124 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 DEFA4P12838 97 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 POLR2IP36954 125 aaKnown RBP5.74□□□□□ -1.49
XRN1-212ENST00000486211 TPBGQ13641 420 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 XAF1Q6GPH4 301 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 SPSB3Q6PJ21 355 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 Q6ZRN7 208 aaPredicted RBP5.74□□□□□ -1.49
XRN1-212ENST00000486211 TCF24Q7RTU0 167 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 LHFPL3Q86UP9 236 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 VKORC1L1Q8N0U8 176 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 JAGN1Q8N5M9 183 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 VN1R17PQ8TDU5 208 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 OR10C1Q96KK4 312 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 CLUHP3Q96NS8 147 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 NEU1Q99519 415 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 NIPSNAP3BQ9BS92 247 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 OR51E2Q9H255 320 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 CHMP1AQ9HD42 196 aaPredicted RBP5.74□□□□□ -1.49
XRN1-212ENST00000486211 IMPAD1Q9NX62 359 aa5.74□□□□□ -1.49
XRN1-212ENST00000486211 EXOGQ9Y2C4 368 aaKnown RBP5.74□□□□□ -1.49
XRN1-212ENST00000486211 IGHV3OR16-13A0A075B7E8 117 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 IGHV3-74A0A0B4J1X5 117 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 KBTBD11O94819 623 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 HTR2CP28335 458 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 MAS1LP35410 378 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 PSMD7P51665 324 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 EMP1P54849 157 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 PAFAH1B2P68402 229 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 MRPL28Q13084 256 aaKnown RBP5.73□□□□□ -1.49
XRN1-212ENST00000486211 ARFRP1Q13795 201 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 OR2G6Q5TZ20 316 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 FAM222AQ5U5X8 452 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 KDM4DQ6B0I6 523 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 ZNF705AQ6ZN79 300 aaPredicted RBP5.73□□□□□ -1.49
XRN1-212ENST00000486211 PUSL1Q8N0Z8 303 aaKnown RBP5.73□□□□□ -1.49
XRN1-212ENST00000486211 OR6M1Q8NGM8 313 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 TMEM167AQ8TBQ9 72 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 ADTRPQ96IZ2 230 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 CMTM3Q96MX0 182 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 Q9H3A6 140 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 Q9N2K0 584 aa5.73□□□□□ -1.49
XRN1-212ENST00000486211 TRBV5-5A0A0J9YX44 114 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 IGLC7A0M8Q6 106 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 TMEM189A5PLL7 270 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 ZNF705FA8MVS1 300 aaPredicted RBP5.72□□□□□ -1.49
XRN1-212ENST00000486211 NUPL2O15504 423 aaKnown RBP5.72□□□□□ -1.49
XRN1-212ENST00000486211 CD3GP09693 182 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 ZNF705DP0CH99 300 aaPredicted RBP5.72□□□□□ -1.49
XRN1-212ENST00000486211 ZNF705BP0CI00 300 aaPredicted RBP5.72□□□□□ -1.49
XRN1-212ENST00000486211 UBE2UQ5VVX9 321 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 CDH26Q8IXH8 852 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 DGCR14Q96DF8 476 aaKnown RBP5.72□□□□□ -1.49
XRN1-212ENST00000486211 LGALS12Q96DT0 336 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 MRPL48Q96GC5 212 aaKnown RBP5.72□□□□□ -1.49
XRN1-212ENST00000486211 ATP6V0BQ99437 205 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 SRSF8Q9BRL6 282 aaKnown RBP5.72□□□□□ -1.49
XRN1-212ENST00000486211 RIMS4Q9H426 269 aaPredicted RBP5.72□□□□□ -1.49
XRN1-212ENST00000486211 Q9H8V8 135 aa5.72□□□□□ -1.49
XRN1-212ENST00000486211 TAGLN3Q9UI15 199 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms