RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ZNF585BQ52M93 769 aa14.95□□□□□ -0.02
SNX5-213ENST00000486039 HAPLN4Q86UW8 402 aa14.95□□□□□ -0.02
SNX5-213ENST00000486039 CMTM1Q8IZ96 169 aa14.95□□□□□ -0.02
SNX5-213ENST00000486039 DMBX1Q8NFW5 382 aa14.95□□□□□ -0.02
SNX5-213ENST00000486039 OR52I2Q8NH67 350 aa14.95□□□□□ -0.02
SNX5-213ENST00000486039 FCAMRQ8WWV6 532 aa14.95□□□□□ -0.02
SNX5-213ENST00000486039 DGCR14Q96DF8 476 aaKnown RBP14.95□□□□□ -0.02
SNX5-213ENST00000486039 FANCD2OSQ96PS1 177 aa14.95□□□□□ -0.02
SNX5-213ENST00000486039 ELOVL1Q9BW60 279 aa14.95□□□□□ -0.02
SNX5-213ENST00000486039 DPPA5A6NC42 116 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 M0QYG6 137 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 CTDSP2O14595 271 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 CTRB1P17538 263 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 LPAR6P43657 344 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 SYNJ2BPP57105 145 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 OR2B8PP59922 312 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 C15orf32Q32M92 178 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 PHLDA2Q53GA4 152 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 CTRB2Q6GPI1 263 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 IL34Q6ZMJ4 242 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 OR9G4Q8NGQ1 327 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 OR6Q1Q8NGQ2 317 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 RSRP1Q9BUV0 290 aa14.94□□□□□ -0.02
SNX5-213ENST00000486039 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.93□□□□□ -0.02
SNX5-213ENST00000486039 MARCH11A6NNE9 402 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 BMPR1BO00238 502 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 TPPPO94811 219 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 REG1AP05451 166 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 UCP3P55916 312 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 RPEL1Q2QD12 228 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 KLK9Q2XQG4 91 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 LPCAT3Q6P1A2 487 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 LAX1Q8IWV1 398 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 RAB2BQ8WUD1 216 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 WWC2-AS2Q96NR7 200 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 MTFP1Q9UDX5 166 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 FBXL7Q9UJT9 491 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 KLK9Q9UKQ9 250 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 DMRT1Q9Y5R6 373 aa14.93□□□□□ -0.02
SNX5-213ENST00000486039 RGS5O15539 181 aa14.92□□□□□ -0.02
SNX5-213ENST00000486039 NDUFB8O95169 186 aa14.92□□□□□ -0.02
SNX5-213ENST00000486039 IGLV1-51P01701 117 aa14.92□□□□□ -0.02
SNX5-213ENST00000486039 FGF2P09038 288 aa14.92□□□□□ -0.02
SNX5-213ENST00000486039 GP9P14770 177 aa14.92□□□□□ -0.02
SNX5-213ENST00000486039 RPL5P46777 297 aaKnown RBP14.92□□□□□ -0.02
SNX5-213ENST00000486039 TMBIM6P55061 237 aa14.92□□□□□ -0.02
SNX5-213ENST00000486039 DYNC2LI1Q8TCX1 351 aa14.92□□□□□ -0.02
SNX5-213ENST00000486039 COMMD5Q9GZQ3 224 aa14.92□□□□□ -0.02
SNX5-213ENST00000486039 NBEAL2Q6ZNJ1 2754 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 IGLC7A0M8Q6 106 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 KRASP01116 189 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 CD3DP04234 171 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 G6PCP35575 357 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 ERVK-16P61578 105 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 TBC1D26Q86UD7 250 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 LHFPL1Q86WI0 220 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 SLC38A6Q8IZM9 456 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 BCL7BQ9BQE9 202 aa14.91□□□□□ -0.02
SNX5-213ENST00000486039 IGLV11-55A0A075B6I3 123 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 TEX50A0A1B0GTY4 177 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 IGHV3-23P01764 117 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 CSN3P07498 182 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 NHLRC4P0CG21 123 aaPredicted RBP14.9□□□□□ -0.02
SNX5-213ENST00000486039 RNASE10Q5GAN6 216 aaKnown RBP14.9□□□□□ -0.02
SNX5-213ENST00000486039 CADM3Q8N126 398 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 OR10W1Q8NGF6 305 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 C15orf40Q8WUR7 153 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 QTRT1Q9BXR0 403 aaKnown RBP14.9□□□□□ -0.02
SNX5-213ENST00000486039 CCDC59Q9P031 241 aaKnown RBP14.9□□□□□ -0.02
SNX5-213ENST00000486039 NSG2Q9Y328 171 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 S4R3C0 116 aa14.9□□□□□ -0.02
SNX5-213ENST00000486039 PPP5D1E7EU14 171 aa14.89□□□□□ -0.03
SNX5-213ENST00000486039 DHFRP00374 187 aa14.89□□□□□ -0.03
SNX5-213ENST00000486039 IFNA6P05013 189 aa14.89□□□□□ -0.03
SNX5-213ENST00000486039 TATDN3Q17R31 274 aa14.89□□□□□ -0.03
SNX5-213ENST00000486039 OR4D10Q8NGI6 311 aa14.89□□□□□ -0.03
SNX5-213ENST00000486039 CCDC140Q96MF4 163 aa14.89□□□□□ -0.03
SNX5-213ENST00000486039 SRSF8Q9BRL6 282 aaKnown RBP14.89□□□□□ -0.03
SNX5-213ENST00000486039 FAM212BQ9NTI7 297 aaPredicted RBP14.89□□□□□ -0.03
SNX5-213ENST00000486039 SMAD5-AS1Q9Y6J3 95 aa14.89□□□□□ -0.03
SNX5-213ENST00000486039 TENM3Q9P273 2699 aa14.89□□□□□ -0.03
SNX5-213ENST00000486039 IGKV1-39P01597 117 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 CD74P04233 296 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 IGKV1D-39P04432 117 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 DEFA4P12838 97 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 HIST1H1BP16401 226 aaKnown RBP14.88□□□□□ -0.03
SNX5-213ENST00000486039 TBPP20226 339 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 S100GP29377 79 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 ARRDC1Q8N5I2 433 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 TMEM229BQ8NBD8 167 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 NDUFA4L2Q9NRX3 87 aa14.88□□□□□ -0.03
SNX5-213ENST00000486039 SORL1Q92673 2214 aa14.87□□□□□ -0.03
SNX5-213ENST00000486039 H3BMQ9 156 aa14.87□□□□□ -0.03
SNX5-213ENST00000486039 GABARAPH6UMI1 98 aa14.87□□□□□ -0.03
SNX5-213ENST00000486039 HLA-AP01891 365 aaKnown RBP14.87□□□□□ -0.03
SNX5-213ENST00000486039 TRAPPC2P0DI81 140 aa14.87□□□□□ -0.03
SNX5-213ENST00000486039 TRAPPC2BP0DI82 140 aa14.87□□□□□ -0.03
SNX5-213ENST00000486039 PI3P19957 117 aa14.87□□□□□ -0.03
SNX5-213ENST00000486039 PTBP1P26599 531 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNX5-213ENST00000486039 WT1-ASQ06250 92 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms