RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 F2RP25116 425 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 PTBP1P26599 531 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS50-218ENST00000485994 ECI1P42126 302 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 RPL27AP46776 148 aaKnown RBP5.36□□□□□ -1.55
VPS50-218ENST00000485994 ATP5G2Q06055 141 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 VAX1Q5SQQ9 334 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 CTRB2Q6GPI1 263 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 THOC7Q6I9Y2 204 aaKnown RBP5.36□□□□□ -1.55
VPS50-218ENST00000485994 IDO2Q6ZQW0 420 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 GPR141Q7Z602 305 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 CMTM1Q8IZ96 169 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 OR5H2Q8NGV7 314 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 CASTOR1Q8WTX7 329 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 AP3S1Q92572 193 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 FANCD2OSQ96PS1 177 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 OR4C12Q96R67 309 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 ATP6V0BQ99437 205 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 PHB2Q99623 299 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 ZNF2Q9BSG1 426 aaPredicted RBP5.36□□□□□ -1.55
VPS50-218ENST00000485994 AKIP1Q9NQ31 210 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 COA4Q9NYJ1 87 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 TAS2R8Q9NYW2 309 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 EHFQ9NZC4 300 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 COMMD9Q9P000 198 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 RABL2AQ9UBK7 228 aaPredicted RBP5.36□□□□□ -1.55
VPS50-218ENST00000485994 RABL2BQ9UNT1 228 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 DMRT1Q9Y5R6 373 aa5.36□□□□□ -1.55
VPS50-218ENST00000485994 A0A1B0GW64 132 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 CGB1A6NKQ9 187 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 H0Y980 276 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 LGALS9O00182 355 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 RBMXL2O75526 392 aaKnown RBP5.35□□□□□ -1.55
VPS50-218ENST00000485994 PMP2P02689 132 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 HLA-GP17693 338 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 PSMB6P28072 239 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 RCVRNP35243 200 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 HRH1P35367 487 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 TMBIM6P55061 237 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 OR2B8PP59922 312 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 HERV-K104P61576 105 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 RHOGP84095 191 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 ZNF45Q02386 682 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 SSBP1Q04837 148 aaKnown RBP5.35□□□□□ -1.55
VPS50-218ENST00000485994 CD69Q07108 199 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 SPCS2Q15005 226 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 ZNF585BQ52M93 769 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 OR4A47Q6IF82 309 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 HSD17B13Q7Z5P4 300 aaPredicted RBP5.35□□□□□ -1.55
VPS50-218ENST00000485994 GPHB5Q86YW7 130 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 VKORC1L1Q8N0U8 176 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 OR9G4Q8NGQ1 327 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 OR2K2Q8NGT1 345 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 DGCR14Q96DF8 476 aaKnown RBP5.35□□□□□ -1.55
VPS50-218ENST00000485994 ZNF486Q96H40 463 aaPredicted RBP5.35□□□□□ -1.55
VPS50-218ENST00000485994 FYTTD1Q96QD9 318 aaKnown RBP5.35□□□□□ -1.55
VPS50-218ENST00000485994 RSRP1Q9BUV0 290 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 FKBP11Q9NYL4 201 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 SMAD5-AS1Q9Y6J3 95 aa5.35□□□□□ -1.55
VPS50-218ENST00000485994 STAB2Q8WWQ8 2551 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 IGLV11-55A0A075B6I3 123 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 TRBV7-1A0A0A6YYK4 115 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 ANKRD34BA5PLL1 514 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 MEIS3P1A6NDR6 274 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 HMX3A6NHT5 357 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 MARCH11A6NNE9 402 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 MPPED1O15442 326 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 TNFSF12O43508 249 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 HPGDSO60760 199 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 CSN3P07498 182 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 GP9P14770 177 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 RPA2P15927 270 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 SPNP16150 400 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 TBPP20226 339 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 HLA-DMAP28067 261 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 S100GP29377 79 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 FXYD4P59646 89 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 RND3P61587 244 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 TSPAN5P62079 268 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 MRPS10P82664 201 aaKnown RBP5.34□□□□□ -1.55
VPS50-218ENST00000485994 RPEL1Q2QD12 228 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 AADACL3Q5VUY0 350 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 TMEM17Q86X19 198 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 CLVS1Q8IUQ0 354 aaPredicted RBP5.34□□□□□ -1.55
VPS50-218ENST00000485994 Q8N1Y9 231 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 ARRDC1Q8N5I2 433 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 OR1L8Q8NGR8 309 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 DYNC2LI1Q8TCX1 351 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 CXorf58Q96LI9 332 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 PRR25Q96S07 402 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 ABHD1Q96SE0 405 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 TSC22D3Q99576 134 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 THYN1Q9P016 225 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 PEMTQ9UBM1 199 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 MTFP1Q9UDX5 166 aa5.34□□□□□ -1.55
VPS50-218ENST00000485994 TRAV3A0A0B4J244 114 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 TEX50A0A1B0GTY4 177 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 IGLC7A0M8Q6 106 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 DPPA5A6NC42 116 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 FAM25AB3EWG3 89 aa5.33□□□□□ -1.56
VPS50-218ENST00000485994 FAM25CB3EWG5 89 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms