RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SNAPC5O75971 98 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 IGKV1-39P01597 117 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 PF4P02776 101 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 IGKV1D-39P04432 117 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 OR9G9P0C7N8 305 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 AKR1C4P17516 323 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 CD40LGP29965 261 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 RAB9AP51151 201 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 CCR6P51684 374 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 AKR1C2P52895 323 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 TPPP2P59282 170 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 OR2B8PP59922 312 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 DEFA5Q01523 94 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 LINC00299Q6ZSB3 139 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 H2BFWTQ7Z2G1 175 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 TMED4Q7Z7H5 227 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 ZNF695Q8IW36 515 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 SGPP2Q8IWX5 399 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 RNF152Q8N8N0 203 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 S100ZQ8WXG8 99 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 TMEM230Q96A57 120 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 SEC22AQ96IW7 307 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 OR5B12Q96R08 314 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 COMMD5Q9GZQ3 224 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 ZFP57Q9NU63 452 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 NSG2Q9Y328 171 aa9.24□□□□□ -0.93
HPS4-214ENST00000485842 A0A1B0GW64 132 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 CENPXA8MT69 81 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 TEX22C9J3V5 150 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 E7EUB6 86 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 TRGV3P03979 118 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 IL6RP08887 468 aaPredicted RBP9.23□□□□□ -0.93
HPS4-214ENST00000485842 UCP1P25874 307 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 DEFB136Q30KP8 78 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 RNASE11Q8TAA1 199 aaKnown RBP9.23□□□□□ -0.93
HPS4-214ENST00000485842 MYOZ3Q8TDC0 251 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 TMEM68Q96MH6 324 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 TSC22D3Q99576 134 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 HINT2Q9BX68 163 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 TMEM222Q9H0R3 208 aa9.23□□□□□ -0.93
HPS4-214ENST00000485842 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
HPS4-214ENST00000485842 B3GALNT1O75752 331 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 ATG12O94817 140 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 IGKV1-5P01602 117 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 PRH1P02810 166 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 REG1AP05451 166 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 CDX1P47902 265 aaPredicted RBP9.22□□□□□ -0.93
HPS4-214ENST00000485842 RBMS2Q15434 407 aaKnown RBP9.22□□□□□ -0.93
HPS4-214ENST00000485842 IZUMO4Q1ZYL8 232 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 C19orf35Q6ZS72 473 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 ZNF491Q8N8L2 437 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 C4orf3Q8WVX3 66 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 DUX3Q96PT4 197 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 SLC25A21Q9BQT8 299 aaPredicted RBP9.22□□□□□ -0.93
HPS4-214ENST00000485842 C7orf50Q9BRJ6 194 aaKnown RBP9.22□□□□□ -0.93
HPS4-214ENST00000485842 CCDC32Q9BV29 185 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 WDR12Q9GZL7 423 aaKnown RBP9.22□□□□□ -0.93
HPS4-214ENST00000485842 SLA2Q9H6Q3 261 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 GNB4Q9HAV0 340 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 PRR13Q9NZ81 148 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 OR51B2Q9Y5P1 312 aa9.22□□□□□ -0.93
HPS4-214ENST00000485842 TEX50A0A1B0GTY4 177 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 CGB1A6NKQ9 187 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 C15orf61A6NNL5 157 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 H3BUA1 57 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 IGHV3-11P01762 117 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 AREGP15514 252 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 DHODHQ02127 395 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 ZNF846Q147U1 533 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 TMEM268Q5VZI3 342 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 ETV3LQ6ZN32 361 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 CENPSQ8N2Z9 138 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 OR1L8Q8NGR8 309 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 OR4A16Q8NH70 328 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 LHFPL5Q8TAF8 219 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 GLYATL2Q8WU03 294 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 RRNAD1Q96FB5 475 aaKnown RBP9.21□□□□□ -0.94
HPS4-214ENST00000485842 UBE2E2Q96LR5 201 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 QTRT1Q9BXR0 403 aaKnown RBP9.21□□□□□ -0.94
HPS4-214ENST00000485842 PRNDQ9UKY0 176 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 KCNIP3Q9Y2W7 256 aa9.21□□□□□ -0.94
HPS4-214ENST00000485842 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 PLA2G10O15496 165 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 LYRM1O43325 122 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 NDUFB6O95139 128 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 CDS2O95674 445 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 TRAPPC2P0DI81 140 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 TRAPPC2BP0DI82 140 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 VAMP1P23763 118 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 SLC6A1P30531 599 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 BTCP35070 178 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 MECP2P51608 486 aaKnown RBP9.2□□□□□ -0.94
HPS4-214ENST00000485842 RAB25P57735 213 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 SUPT4H1P63272 117 aaKnown RBP9.2□□□□□ -0.94
HPS4-214ENST00000485842 KIAA0141Q14154 515 aaPredicted RBP9.2□□□□□ -0.94
HPS4-214ENST00000485842 TMEM187Q14656 261 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 SLC25A42Q86VD7 318 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 TTC9CQ8N5M4 171 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 OR10W1Q8NGF6 305 aa9.2□□□□□ -0.94
HPS4-214ENST00000485842 RBPMSQ93062 196 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms