RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 KLK9Q9UKQ9 250 aa12.34□□□□□ -0.43
UPF3A-208ENST00000484246 PKD1L1Q8TDX9 2849 aa12.34□□□□□ -0.43
UPF3A-208ENST00000484246 A0A1B0GW64 132 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 NPIPB5A8MRT5 1133 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 CCL24O00175 119 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 PI3P19957 117 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 KPRPQ5T749 579 aaPredicted RBP12.33□□□□□ -0.44
UPF3A-208ENST00000484246 SAMD5Q5TGI4 173 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 SLC25A42Q86VD7 318 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 MRPL41Q8IXM3 137 aaKnown RBP12.33□□□□□ -0.44
UPF3A-208ENST00000484246 TTC9CQ8N5M4 171 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 DMBX1Q8NFW5 382 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 PHB2Q99623 299 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 C5orf66Q9H5L9 145 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 HRASLSQ9HDD0 168 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 COPZ2Q9P299 210 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 SCP2D1Q9UJQ7 156 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 GPR132Q9UNW8 380 aa12.33□□□□□ -0.44
UPF3A-208ENST00000484246 CMYA5Q8N3K9 4069 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 DUS4LO95620 317 aaKnown RBP12.32□□□□□ -0.44
UPF3A-208ENST00000484246 IGKV1-39P01597 117 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 IGKV1D-39P04432 117 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 CRYGCP07315 174 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 LGALS1P09382 135 aaKnown RBP12.32□□□□□ -0.44
UPF3A-208ENST00000484246 UCP1P25874 307 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 TPPP2P59282 170 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 OR2B8PP59922 312 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 TOMM5Q8N4H5 51 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 SEC22AQ96IW7 307 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 SCGB3A2Q96PL1 93 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 TSC22D3Q99576 134 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 RTBDNQ9BSG5 229 aaPredicted RBP12.32□□□□□ -0.44
UPF3A-208ENST00000484246 C14orf166Q9Y224 244 aaKnown RBP12.32□□□□□ -0.44
UPF3A-208ENST00000484246 ZNF257Q9Y2Q1 563 aa12.32□□□□□ -0.44
UPF3A-208ENST00000484246 TRBV9A0A0B4J1U6 114 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 TRAV3A0A0B4J244 114 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 C3orf85A0A1B0GTC6 90 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 CGB1A6NKQ9 187 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 E7EUB6 86 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 KRASP01116 189 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 TRGV3P03979 118 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 SERPINE2P07093 398 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 OR5T1Q8NG75 326 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 RCC1LQ96I51 464 aaKnown RBP12.31□□□□□ -0.44
UPF3A-208ENST00000484246 USMG5Q96IX5 58 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 TP53RKQ96S44 253 aa12.31□□□□□ -0.44
UPF3A-208ENST00000484246 A0A0G2JLM5 398 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 FAM223BA6NKX1 122 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 P0C879 139 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 CD33P20138 364 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 G6PCP35575 357 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 ZNF45Q02386 682 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 DEFB136Q30KP8 78 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 HSD17B13Q7Z5P4 300 aaPredicted RBP12.3□□□□□ -0.44
UPF3A-208ENST00000484246 FAM223AQ8IWN6 122 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 OR5B3Q8NH48 314 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 CASTOR1Q8WTX7 329 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 SDHCQ99643 169 aaPredicted RBP12.3□□□□□ -0.44
UPF3A-208ENST00000484246 QTRT1Q9BXR0 403 aaKnown RBP12.3□□□□□ -0.44
UPF3A-208ENST00000484246 COMMD5Q9GZQ3 224 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 NAA60Q9H7X0 242 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 TMEM14BQ9NUH8 114 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 MCUBQ9NWR8 336 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 PRNDQ9UKY0 176 aa12.3□□□□□ -0.44
UPF3A-208ENST00000484246 IGLC7A0M8Q6 106 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 HMX3A6NHT5 357 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 CRYM-AS1A6NIL9 109 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 C15orf61A6NNL5 157 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 ATG12O94817 140 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 OR8U8P0C7N1 319 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 CTRB1P17538 263 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 PSMB6P28072 239 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 CTRB2Q6GPI1 263 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 OR1L8Q8NGR8 309 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 GALNT14Q96FL9 552 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 MS4A10Q96PG2 267 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 MCRIP2Q9BUT9 160 aaKnown RBP12.29□□□□□ -0.44
UPF3A-208ENST00000484246 GPR61Q9BZJ8 451 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 COA4Q9NYJ1 87 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 FKBP11Q9NYL4 201 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 PLXNB1O43157 2135 aa12.29□□□□□ -0.44
UPF3A-208ENST00000484246 SNAPC5O75971 98 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 APELAP0DMC3 54 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 MYOD1P15172 320 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 AREGP15514 252 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 BAK1Q16611 211 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 BEAN1Q3B7T3 259 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 NECAP1Q8NC96 275 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 OR11H1Q8NG94 326 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 OR1N2Q8NGR9 330 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 TMEM230Q96A57 120 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 DUX3Q96PT4 197 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 FYTTD1Q96QD9 318 aaKnown RBP12.28□□□□□ -0.44
UPF3A-208ENST00000484246 SLC25A21Q9BQT8 299 aaPredicted RBP12.28□□□□□ -0.44
UPF3A-208ENST00000484246 TMEM222Q9H0R3 208 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 BATF3Q9NR55 127 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 NDUFA4L2Q9NRX3 87 aa12.28□□□□□ -0.44
UPF3A-208ENST00000484246 ZNF355PQ9NSJ1 428 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms