RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 FBXW9Q5XUX1 488 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 CDX2Q99626 313 aaPredicted RBP16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 PILRBQ9UKJ0 227 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 A8MXE2 369 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 AMTP48728 403 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 HTD2P86397 168 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 TBC1D28Q2M2D7 210 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 TMEM251Q8N6I4 163 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 OR4A16Q8NH70 328 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 RNASE7Q9H1E1 156 aaKnown RBP16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 FOXJ2Q9P0K8 574 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 HYPMO75409 117 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 CFIP05156 583 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 SP1P08047 785 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 TMEM136Q6ZRR5 245 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 DOLPP1Q86YN1 238 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 STPG3Q8N7X2 389 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 OR4P4Q8NGL7 312 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 UHRF2Q96PU4 802 aa16.33■□□□□ 0.2
RPUSD3-216ENST00000484134 AHRRA9YTQ3 701 aa16.32■□□□□ 0.2
RPUSD3-216ENST00000484134 IGLC2P0DOY2 106 aa16.32■□□□□ 0.2
RPUSD3-216ENST00000484134 IGLC3P0DOY3 106 aa16.32■□□□□ 0.2
RPUSD3-216ENST00000484134 PMCHP20382 165 aa16.32■□□□□ 0.2
RPUSD3-216ENST00000484134 MPV17P39210 176 aa16.32■□□□□ 0.2
RPUSD3-216ENST00000484134 LY96Q9Y6Y9 160 aa16.32■□□□□ 0.2
RPUSD3-216ENST00000484134 SUMO1P63165 101 aaKnown RBP16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 RELBQ01201 579 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 SSPNQ14714 243 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 FXYD3Q14802 87 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 CENPWQ5EE01 88 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 B4GALT7Q9UBV7 327 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 MED13Q9UHV7 2174 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 TRBV9A0A0B4J1U6 114 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 PATE3B3GLJ2 98 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 IGHV3-13P01766 116 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 IGHV3-7P01780 117 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 TDGF1P13385 188 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 TCL1AP56279 114 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 RPP30P78346 268 aaKnown RBP16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 CX3CL1P78423 397 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 ACP7Q6ZNF0 438 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 STARD4Q96DR4 205 aa16.31■□□□□ 0.2
RPUSD3-216ENST00000484134 C15orf65H3BRN8 121 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 RHOBP62745 196 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 NIT1Q86X76 327 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 WNT10AQ9GZT5 417 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 NPVFQ9HCQ7 196 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 OBP2BQ9NPH6 170 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 SAA2-SAA4A0A096LPE2 208 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 IQCF6A8MYZ5 107 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 ZNF253O75346 499 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 C3orf79P0CE67 100 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 CRYBB3P26998 211 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 PQLC2Q6ZP29 291 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 MIR17HGQ75NE6 70 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 FAM19A2Q8N3H0 131 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 KCNS1Q96KK3 526 aa16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 YLPM1P49750 1951 aaKnown RBP16.3■□□□□ 0.2
RPUSD3-216ENST00000484134 ACTL6BO94805 426 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 GPR12P47775 334 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 RPL39P5Q59GN2 51 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 Q6ZVH6 145 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 NANOS1Q8WY41 292 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 UQCR10Q9UDW1 63 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 HELTA6NFD8 242 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 BMPR1BO00238 502 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 GABRA6Q16445 453 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 MAJINQ3KP22 176 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 OR10J3Q5JRS4 329 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 Q6ZN92 141 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 OR52E5Q8NH55 327 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 TCF19Q9Y242 345 aa16.29■□□□□ 0.2
RPUSD3-216ENST00000484134 OR5G3P0C626 314 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 SRIP30626 198 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 GNG4P50150 75 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 LAMTOR2Q9Y2Q5 125 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 TRAV34A0A0B4J273 112 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 M0R1X1 148 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 CCL25O15444 150 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 AREGP15514 252 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 TEPPQ6URK8 271 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 ATOH7Q8N100 152 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 TXN2Q99757 166 aa16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 DSPP15924 2871 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-216ENST00000484134 FAM90A9PA6NNJ1 464 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 ZNF324O75467 553 aaPredicted RBP16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 OR10J4P0C629 311 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 IGFBP2P18065 325 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 PRRX1P54821 245 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 ASPHD1Q5U4P2 390 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 PMS2CLQ68D20 193 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 MRPL54Q6P161 138 aaKnown RBP16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 WDR82Q6UXN9 313 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 C1orf229Q6ZS94 237 aaPredicted RBP16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 PRR7Q8TB68 274 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 KLF14Q8TD94 323 aaPredicted RBP16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 TMEM140Q9NV12 185 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 WDFY4Q6ZS81 3184 aa16.27■□□□□ 0.2
RPUSD3-216ENST00000484134 LNP1A1A4G5 178 aa16.27■□□□□ 0.19
RPUSD3-216ENST00000484134 LINC00869P0C866 280 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms