RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ENY2Q9NPA8 101 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 HSPB7Q9UBY9 170 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 IGHV3OR16-10A0A075B7F0 116 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 A0A0G2JRQ6 117 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 A0A0U1RQK1 487 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 BTBD17A6NE02 478 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 C15orf61A6NNL5 157 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 SRRM4A7MD48 611 aaKnown RBP11.2□□□□□ -0.62
SMAD9-204ENST00000483941 NBR2O15453 112 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 SYNGR2O43760 224 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 DEDDO75618 318 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 AVPP01185 164 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 FSHBP01225 129 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 MBPP02686 304 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-204ENST00000483941 IL6RP08887 468 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-204ENST00000483941 TAS2R30P59541 319 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 HSPE1P61604 102 aaKnown RBP11.2□□□□□ -0.62
SMAD9-204ENST00000483941 RPL23AP62750 156 aaKnown RBP11.2□□□□□ -0.62
SMAD9-204ENST00000483941 RELBQ01201 579 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 TNFRSF9Q07011 255 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 PSG5Q15238 335 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 MMDQ15546 238 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 PDLIM3Q53GG5 364 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-204ENST00000483941 RUSC1-AS1Q66K80 236 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 Q6ZRM9 215 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 ZNF546Q86UE3 836 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 VKORC1L1Q8N0U8 176 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
SMAD9-204ENST00000483941 AJUBAQ96IF1 538 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 HIPK2Q9H2X6 1198 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 TMEM14BQ9NUH8 114 aa11.2□□□□□ -0.62
SMAD9-204ENST00000483941 LSM5Q9Y4Y9 91 aaKnown RBP11.2□□□□□ -0.62
SMAD9-204ENST00000483941 FXYD6-FXYD2A0A087WZ82 144 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 K7EPK0 472 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 RRHO14718 337 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 SLC25A17O43808 307 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 IGLV2-23P01705 113 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 LYL1P12980 280 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 SRP14P37108 136 aaKnown RBP11.19□□□□□ -0.62
SMAD9-204ENST00000483941 P2RY1P47900 373 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 F2RL1P55085 397 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 ATP5IP56385 69 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-204ENST00000483941 CXorf66Q5JRM2 361 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-204ENST00000483941 C16orf82Q7Z2V1 217 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 HSD17B13Q7Z5P4 300 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-204ENST00000483941 PPP1R27Q86WC6 154 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 DYNAPQ8N1N2 210 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 FAM71E2Q8N5Q1 922 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 OR5R1Q8NH85 324 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 DCUN1D4Q92564 292 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 SLC25A31Q9H0C2 315 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
SMAD9-204ENST00000483941 SIGLEC9Q9Y336 463 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 OR51B2Q9Y5P1 312 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 WSB1Q9Y6I7 421 aa11.19□□□□□ -0.62
SMAD9-204ENST00000483941 A0A0D9SG52 128 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 A0A1W2PN81 502 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 NCBP2LA6PVI3 153 aaKnown RBP11.18□□□□□ -0.62
SMAD9-204ENST00000483941 CEBPZOSA8MTT3 80 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 M0QZK8 103 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 CHST1O43916 411 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 NDUFA3O95167 84 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 CHRNA7P36544 502 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 PRSS8Q16651 343 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 IL17RELQ6ZVW7 336 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 Q8N6K4 173 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 C17orf50Q8WW18 174 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 ZDHHC16Q969W1 377 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 SMIM8Q96KF7 97 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 SSX3Q99909 188 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 QTRT1Q9BXR0 403 aaKnown RBP11.18□□□□□ -0.62
SMAD9-204ENST00000483941 ZC4H2Q9NQZ6 224 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 MBD2Q9UBB5 411 aa11.18□□□□□ -0.62
SMAD9-204ENST00000483941 TRAV14DV4A0A0A6YYC5 116 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 SMLR1H3BR10 107 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 SSSCA1O60232 199 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 TSC22D2O75157 780 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 OR2F2O95006 317 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 CRYGBP07316 175 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 POLR2GP62487 172 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMAD9-204ENST00000483941 CD300CQ08708 224 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 OR2F1Q13607 317 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 HNF4GQ14541 408 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 IZUMO4Q1ZYL8 232 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 C5orf64Q2M2E5 130 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 ACOT7LQ6ZUV0 252 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 DTD1Q8TEA8 209 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 RASL11BQ9BPW5 248 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
SMAD9-204ENST00000483941 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
SMAD9-204ENST00000483941 RCL1Q9Y2P8 373 aaKnown RBP11.17□□□□□ -0.62
SMAD9-204ENST00000483941 TGP01266 2768 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 FGF16O43320 207 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 TSPAN9O75954 239 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 OR2B8PP59922 312 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 ERHP84090 104 aaKnown RBP11.16□□□□□ -0.62
SMAD9-204ENST00000483941 PRCDQ00LT1 54 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms