RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 MRPL41Q8IXM3 137 aaKnown RBP20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 LINC00482Q8N8I6 264 aa20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 ZNF486Q96H40 463 aaPredicted RBP20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 P2RX4Q99571 388 aa20.59■□□□□ 0.89
GTF3C4-202ENST00000483873 E7EUB6 86 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 CCL24O00175 119 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 CTSDP07339 412 aaPredicted RBP20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 S100GP29377 79 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 DMBX1Q8NFW5 382 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 ZFAND1Q8TCF1 268 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 AIFM2Q9BRQ8 373 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 RTBDNQ9BSG5 229 aaPredicted RBP20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 C5orf66Q9H5L9 145 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 ZNF355PQ9NSJ1 428 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 TMEM140Q9NV12 185 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 VSIG4Q9Y279 399 aa20.58■□□□□ 0.88
GTF3C4-202ENST00000483873 MYCNOSP40205 109 aa20.57■□□□□ 0.88
GTF3C4-202ENST00000483873 TPPP2P59282 170 aa20.57■□□□□ 0.88
GTF3C4-202ENST00000483873 WFDC9Q8NEX5 89 aa20.57■□□□□ 0.88
GTF3C4-202ENST00000483873 NOTCH3Q9UM47 2321 aa20.57■□□□□ 0.88
GTF3C4-202ENST00000483873 A0A1B0GW64 132 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 HMX3A6NHT5 357 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 I3L521 148 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 TRGV3P03979 118 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 IL6RP08887 468 aaPredicted RBP20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 RPL27AP46776 148 aaKnown RBP20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 PIGPP57054 158 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 RND3P61587 244 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 RPL8P62917 257 aaKnown RBP20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 DEFA5Q01523 94 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 OXLD1Q5BKU9 147 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 TMEM68Q96MH6 324 aa20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 ALX4Q9H161 411 aaPredicted RBP20.56■□□□□ 0.88
GTF3C4-202ENST00000483873 MARCH11A6NNE9 402 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 TEX22C9J3V5 150 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 UPK2O00526 184 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 MPPED1O15442 326 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 MAS1LP35410 378 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 ASAH1Q13510 395 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 SAMD5Q5TGI4 173 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 OR4A5Q8NH83 315 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 SPIN2AQ99865 258 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 SPIN2BQ9BPZ2 258 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 COA4Q9NYJ1 87 aa20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 C14orf166Q9Y224 244 aaKnown RBP20.55■□□□□ 0.88
GTF3C4-202ENST00000483873 WIPF1O43516 503 aa20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 KRASP01116 189 aa20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 IGLL1P15814 213 aa20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 HLA-GP17693 338 aa20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 G6PCP35575 357 aa20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 ERVK-16P61578 105 aa20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 RBMS2Q15434 407 aaKnown RBP20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 ADAD2Q8NCV1 583 aaKnown RBP20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 FYTTD1Q96QD9 318 aaKnown RBP20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 SLC25A21Q9BQT8 299 aaPredicted RBP20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 SLA2Q9H6Q3 261 aa20.54■□□□□ 0.88
GTF3C4-202ENST00000483873 IGKV1-39P01597 117 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 IGHV3-11P01762 117 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 IGKV1D-39P04432 117 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 OR9G9P0C7N8 305 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 OR11H1Q8NG94 326 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 SCGB3A2Q96PL1 93 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 COPZ2Q9P299 210 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 CGB1A6NKQ9 187 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 H3BUA1 57 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 NDUFB6O95139 128 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 RAB25P57735 213 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 RUNX1Q01196 453 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 CCDC71LQ8N9Z2 235 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 TMEM230Q96A57 120 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 TP53RKQ96S44 253 aa20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 FAM212BQ9NTI7 297 aaPredicted RBP20.53■□□□□ 0.88
GTF3C4-202ENST00000483873 RBMXL2O75526 392 aaKnown RBP20.52■□□□□ 0.87
GTF3C4-202ENST00000483873 PRH1P02810 166 aa20.52■□□□□ 0.87
GTF3C4-202ENST00000483873 FHL3Q13643 280 aa20.52■□□□□ 0.87
GTF3C4-202ENST00000483873 C19orf35Q6ZS72 473 aa20.52■□□□□ 0.87
GTF3C4-202ENST00000483873 LGALS1P09382 135 aaKnown RBP20.51■□□□□ 0.87
GTF3C4-202ENST00000483873 NSG2Q9Y328 171 aa20.51■□□□□ 0.87
GTF3C4-202ENST00000483873 H0Y980 276 aa20.5■□□□□ 0.87
GTF3C4-202ENST00000483873 DEFA6Q01524 100 aa20.5■□□□□ 0.87
GTF3C4-202ENST00000483873 BEAN1Q3B7T3 259 aa20.5■□□□□ 0.87
GTF3C4-202ENST00000483873 TMED4Q7Z7H5 227 aa20.5■□□□□ 0.87
GTF3C4-202ENST00000483873 TTC9CQ8N5M4 171 aa20.5■□□□□ 0.87
GTF3C4-202ENST00000483873 OR1N2Q8NGR9 330 aa20.5■□□□□ 0.87
GTF3C4-202ENST00000483873 SEC22AQ96IW7 307 aa20.5■□□□□ 0.87
GTF3C4-202ENST00000483873 FLVCR2Q9UPI3 526 aa20.5■□□□□ 0.87
GTF3C4-202ENST00000483873 C3orf85A0A1B0GTC6 90 aa20.49■□□□□ 0.87
GTF3C4-202ENST00000483873 AREGP15514 252 aa20.49■□□□□ 0.87
GTF3C4-202ENST00000483873 OR2B8PP59922 312 aa20.49■□□□□ 0.87
GTF3C4-202ENST00000483873 SP6Q3SY56 376 aa20.49■□□□□ 0.87
GTF3C4-202ENST00000483873 MZT2BQ6NZ67 158 aa20.49■□□□□ 0.87
GTF3C4-202ENST00000483873 CRYM-AS1A6NIL9 109 aa20.48■□□□□ 0.87
GTF3C4-202ENST00000483873 BRI3O95415 125 aa20.48■□□□□ 0.87
GTF3C4-202ENST00000483873 SERPINE2P07093 398 aa20.48■□□□□ 0.87
GTF3C4-202ENST00000483873 ZNF616Q08AN1 781 aa20.48■□□□□ 0.87
GTF3C4-202ENST00000483873 RCC1LQ96I51 464 aaKnown RBP20.48■□□□□ 0.87
GTF3C4-202ENST00000483873 COMMD5Q9GZQ3 224 aa20.48■□□□□ 0.87
GTF3C4-202ENST00000483873 NAA60Q9H7X0 242 aa20.48■□□□□ 0.87
GTF3C4-202ENST00000483873 DNAH3Q8TD57 4116 aa20.48■□□□□ 0.87
GTF3C4-202ENST00000483873 IGHV4OR15-8A0A075B7B6 117 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms