RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 SLC25A17O43808 307 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 SPDEFO95238 335 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 IGLV2-23P01705 113 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 OR9G9P0C7N8 305 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 P0C879 139 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 SAA1P0DJI8 122 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-205ENST00000482968 FOSL1P15407 271 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 EBI3Q14213 229 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 THNSL2Q86YJ6 484 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 FAM219AQ8IW50 185 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 RNF5Q99942 180 aa12.04□□□□□ -0.48
PHGDH-205ENST00000482968 A0A1B0GU03 582 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 RBMXL2O75526 392 aaKnown RBP12.03□□□□□ -0.48
PHGDH-205ENST00000482968 NXPH3O95157 252 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 TMEM11P17152 192 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 SMCO1Q147U7 214 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 MMDQ15546 238 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 POU2AF1Q16633 256 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 LRRC75BQ2VPJ9 315 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 CLEC9AQ6UXN8 241 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 ACOT7LQ6ZUV0 252 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 C9orf139Q6ZV77 190 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 Q71RC1 249 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-205ENST00000482968 INO80EQ8NBZ0 244 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-205ENST00000482968 PIFOQ8TCI5 191 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 TSNAXQ99598 290 aaKnown RBP12.03□□□□□ -0.48
PHGDH-205ENST00000482968 SPIN2AQ99865 258 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 SPIN2BQ9BPZ2 258 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 MBD2Q9UBB5 411 aa12.03□□□□□ -0.48
PHGDH-205ENST00000482968 SONP18583 2426 aaKnown RBP12.03□□□□□ -0.48
PHGDH-205ENST00000482968 DYNLT3P51808 116 aa12.02□□□□□ -0.48
PHGDH-205ENST00000482968 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.48
PHGDH-205ENST00000482968 PSG5Q15238 335 aa12.02□□□□□ -0.48
PHGDH-205ENST00000482968 VMA21Q3ZAQ7 101 aa12.02□□□□□ -0.48
PHGDH-205ENST00000482968 THAP6Q8TBB0 222 aa12.02□□□□□ -0.48
PHGDH-205ENST00000482968 NMES1Q9C002 83 aa12.02□□□□□ -0.48
PHGDH-205ENST00000482968 TRAV14DV4A0A0A6YYC5 116 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 NCBP2LA6PVI3 153 aaKnown RBP12.02□□□□□ -0.49
PHGDH-205ENST00000482968 H3BUX3 64 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 SCGB1D2O95969 90 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 SLC25A6P12236 298 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 HNF1AP20823 631 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 OR2B8PP59922 312 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 UBE2KP61086 200 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 DEFA5Q01523 94 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 LRRC37A5PQ49AS3 106 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 C11orf87Q6NUJ2 197 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 PUSL1Q8N0Z8 303 aaKnown RBP12.02□□□□□ -0.49
PHGDH-205ENST00000482968 SVBPQ8N300 66 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 OR4A16Q8NH70 328 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 ZDHHC16Q969W1 377 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 MARC2Q969Z3 335 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 NKX6-2Q9C056 277 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-205ENST00000482968 FBXL15Q9H469 300 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 GSX1Q9H4S2 264 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-205ENST00000482968 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-205ENST00000482968 BET1LQ9NYM9 111 aa12.02□□□□□ -0.49
PHGDH-205ENST00000482968 METTL1Q9UBP6 276 aaKnown RBP12.02□□□□□ -0.49
PHGDH-205ENST00000482968 NBR2O15453 112 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 KBTBD11O94819 623 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 IL6RP08887 468 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-205ENST00000482968 RELBQ01201 579 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 PLGLAQ15195 96 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 LY6EQ16553 131 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-205ENST00000482968 TMEM219Q86XT9 240 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 FOXRED2Q8IWF2 684 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 Q8N6K4 173 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 OR4D5Q8NGN0 318 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 VSTM2AQ8TAG5 236 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 PPP1R1CQ8WVI7 109 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-205ENST00000482968 CLCC1Q96S66 551 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 TPSG1Q9NRR2 321 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 TNFSF18Q9UNG2 199 aa12.01□□□□□ -0.49
PHGDH-205ENST00000482968 UPK2O00526 184 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 RRHO14718 337 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 PITX3O75364 302 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 RLN2P04090 185 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 PJVKQ0ZLH3 352 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 IL15RAQ13261 267 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 TEX45Q8NA69 505 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 NPBQ8NG41 125 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 QTRT1Q9BXR0 403 aaKnown RBP12□□□□□ -0.49
PHGDH-205ENST00000482968 TMEM160Q9NX00 188 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 COA4Q9NYJ1 87 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 KIAA1456Q9P272 454 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 SIGLEC9Q9Y336 463 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 NAV3Q8IVL0 2385 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 TNCP24821 2201 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 MBPP02686 304 aaPredicted RBP12□□□□□ -0.49
PHGDH-205ENST00000482968 CRYGBP07316 175 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 RAB32Q13637 225 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 Q6YL49 198 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 PPP1R27Q86WC6 154 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 TMEM167AQ8TBQ9 72 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 ZNF471Q9BX82 626 aaPredicted RBP12□□□□□ -0.49
PHGDH-205ENST00000482968 TNFRSF19Q9NS68 423 aa12□□□□□ -0.49
PHGDH-205ENST00000482968 PLXNB1O43157 2135 aa11.99□□□□□ -0.49
PHGDH-205ENST00000482968 TET2Q6N021 2002 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms