RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TPPP2P59282 170 aa16.27■□□□□ 0.2
SEC13-217ENST00000482647 ZNF45Q02386 682 aa16.27■□□□□ 0.2
SEC13-217ENST00000482647 FYTTD1Q96QD9 318 aaKnown RBP16.27■□□□□ 0.2
SEC13-217ENST00000482647 COMMD5Q9GZQ3 224 aa16.27■□□□□ 0.2
SEC13-217ENST00000482647 COA4Q9NYJ1 87 aa16.27■□□□□ 0.2
SEC13-217ENST00000482647 GPR132Q9UNW8 380 aa16.27■□□□□ 0.2
SEC13-217ENST00000482647 TNCP24821 2201 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 TRAV3A0A0B4J244 114 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 CCL24O00175 119 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 SNAPC5O75971 98 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 TRGV3P03979 118 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 OR9G9P0C7N8 305 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 INPP1P49441 399 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 ZNF57Q68EA5 555 aaPredicted RBP16.26■□□□□ 0.19
SEC13-217ENST00000482647 SLC25A42Q86VD7 318 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 TTC9CQ8N5M4 171 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 WFDC9Q8NEX5 89 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 RAX2Q96IS3 184 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 C5orf66Q9H5L9 145 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 GNB4Q9HAV0 340 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 BATF3Q9NR55 127 aa16.26■□□□□ 0.19
SEC13-217ENST00000482647 TEX13DA0A0J9YY54 714 aaPredicted RBP16.25■□□□□ 0.19
SEC13-217ENST00000482647 CD33P20138 364 aa16.25■□□□□ 0.19
SEC13-217ENST00000482647 RUNX1Q01196 453 aa16.25■□□□□ 0.19
SEC13-217ENST00000482647 CNPY1Q3B7I2 92 aa16.25■□□□□ 0.19
SEC13-217ENST00000482647 TRIQKQ629K1 86 aa16.25■□□□□ 0.19
SEC13-217ENST00000482647 ETV3LQ6ZN32 361 aa16.25■□□□□ 0.19
SEC13-217ENST00000482647 MRPL41Q8IXM3 137 aaKnown RBP16.25■□□□□ 0.19
SEC13-217ENST00000482647 ADAD2Q8NCV1 583 aaKnown RBP16.25■□□□□ 0.19
SEC13-217ENST00000482647 TP53RKQ96S44 253 aa16.25■□□□□ 0.19
SEC13-217ENST00000482647 A0A0G2JLM5 398 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 HMX3A6NHT5 357 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 TEX22C9J3V5 150 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 E7EUB6 86 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 ATG12O94817 140 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 IGKV1-39P01597 117 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 IGKV1D-39P04432 117 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 OR2B8PP59922 312 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 BAK1Q16611 211 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 DEFB136Q30KP8 78 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 SP6Q3SY56 376 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 LINC00299Q6ZSB3 139 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 H2BFWTQ7Z2G1 175 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 SEC22AQ96IW7 307 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 OR5B12Q96R08 314 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 P2RX4Q99571 388 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 TSC22D3Q99576 134 aa16.24■□□□□ 0.19
SEC13-217ENST00000482647 C13orf42A0A1B0GVH6 325 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 I3L521 148 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 MYOD1P15172 320 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 TRIM16LQ309B1 348 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 LINC00482Q8N8I6 264 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 OR1N2Q8NGR9 330 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 DUX3Q96PT4 197 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 NAA60Q9H7X0 242 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 FKBP11Q9NYL4 201 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 PRNDQ9UKY0 176 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 ZNF257Q9Y2Q1 563 aa16.23■□□□□ 0.19
SEC13-217ENST00000482647 A0A1B0GW64 132 aa16.22■□□□□ 0.19
SEC13-217ENST00000482647 LGALS1P09382 135 aaKnown RBP16.22■□□□□ 0.19
SEC13-217ENST00000482647 OR11H1Q8NG94 326 aa16.22■□□□□ 0.19
SEC13-217ENST00000482647 USMG5Q96IX5 58 aa16.22■□□□□ 0.19
SEC13-217ENST00000482647 SDHCQ99643 169 aaPredicted RBP16.22■□□□□ 0.19
SEC13-217ENST00000482647 SRSF8Q9BRL6 282 aaKnown RBP16.22■□□□□ 0.19
SEC13-217ENST00000482647 QTRT1Q9BXR0 403 aaKnown RBP16.22■□□□□ 0.19
SEC13-217ENST00000482647 NSG2Q9Y328 171 aa16.22■□□□□ 0.19
SEC13-217ENST00000482647 OR51B2Q9Y5P1 312 aa16.22■□□□□ 0.19
SEC13-217ENST00000482647 TEX50A0A1B0GTY4 177 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 CRYM-AS1A6NIL9 109 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 NPIPB5A8MRT5 1133 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 IGHV3-11P01762 117 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 TRAPPC2P0DI81 140 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 TRAPPC2BP0DI82 140 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 UCP1P25874 307 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 DHODHQ02127 395 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 SGPP2Q8IWX5 399 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 OR1L8Q8NGR8 309 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 OR4A16Q8NH70 328 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 SLC25A21Q9BQT8 299 aaPredicted RBP16.21■□□□□ 0.19
SEC13-217ENST00000482647 TMEM222Q9H0R3 208 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 KCNIP3Q9Y2W7 256 aa16.21■□□□□ 0.19
SEC13-217ENST00000482647 NAP1L6A6NFF2 107 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 CGB1A6NKQ9 187 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 DHFRP00374 187 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 CRYGCP07315 174 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 OR5AC1P0C628 307 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 AREGP15514 252 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 PSMB6P28072 239 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 RAB25P57735 213 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 FHL3Q13643 280 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 THOC7Q6I9Y2 204 aaKnown RBP16.2■□□□□ 0.18
SEC13-217ENST00000482647 HSD17B13Q7Z5P4 300 aaPredicted RBP16.2■□□□□ 0.18
SEC13-217ENST00000482647 DPF1Q92782 380 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 RCC1LQ96I51 464 aaKnown RBP16.2■□□□□ 0.18
SEC13-217ENST00000482647 NOTCH1P46531 2555 aa16.2■□□□□ 0.18
SEC13-217ENST00000482647 NOTCH3Q9UM47 2321 aa16.19■□□□□ 0.18
SEC13-217ENST00000482647 FAM223BA6NKX1 122 aa16.19■□□□□ 0.18
SEC13-217ENST00000482647 CDS2O95674 445 aa16.19■□□□□ 0.18
SEC13-217ENST00000482647 PRH1P02810 166 aa16.19■□□□□ 0.18
SEC13-217ENST00000482647 OR8U8P0C7N1 319 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms