RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 MCTS1Q9ULC4 181 aaKnown RBP3.05□□□□□ -1.92
VPS41-212ENST00000482217 HES2Q9Y543 173 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ANKRD31Q8N7Z5 1873 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 UBR2Q8IWV8 1755 aa3.05□□□□□ -1.92
VPS41-212ENST00000482217 ADGBQ8N7X0 1667 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 WDR62O43379 1518 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 MAP3K1Q13233 1512 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 SPATA31E1Q6ZUB1 1445 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 KIAA1107Q9UPP5 1409 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 IGKV6D-21A0A0A0MT36 114 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 TRAV41A0A0B4J266 112 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 IFITM5A6NNB3 132 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 H0YJW9 148 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 TMEM250H0YL14 139 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 ZNF253O75346 499 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 DPM2O94777 84 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 IFNA7P01567 189 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 IGLV2-8P01709 118 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 GPX1P07203 203 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 H2AFZP0C0S5 128 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 ZSCAN5DPP0CG00 497 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 AKAIN1P0CW23 69 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 SMIM10L2AP0DMW4 78 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 SMIM10L2BP0DMW5 78 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 PPIBP23284 216 aaKnown RBP3.04□□□□□ -1.92
VPS41-212ENST00000482217 IL3RAP26951 378 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 GNG4P50150 75 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 RPL23P62829 140 aaKnown RBP3.04□□□□□ -1.92
VPS41-212ENST00000482217 SRPXP78539 464 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 MEF2BQ02080 365 aaPredicted RBP3.04□□□□□ -1.92
VPS41-212ENST00000482217 PYY3Q5JQD4 70 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 GFI1BQ5VTD9 330 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 AMMECR1LQ6DCA0 310 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 Q6Q795 121 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 SLC35E3Q7Z769 313 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 ZNF695Q8IW36 515 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 DRAM1Q8N682 238 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 ZNF645Q8N7E2 425 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 DCANP1Q8TF63 244 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 TWIST2Q8WVJ9 160 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 TMEM106AQ96A25 262 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 ZNF799Q96GE5 643 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 SLC25A21Q9BQT8 299 aaPredicted RBP3.04□□□□□ -1.92
VPS41-212ENST00000482217 CTSZQ9UBR2 303 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 NAT8Q9UHE5 227 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 NUFIP1Q9UHK0 495 aaKnown RBP3.04□□□□□ -1.92
VPS41-212ENST00000482217 PYGO1Q9Y3Y4 419 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 FLVCR1Q9Y5Y0 555 aa3.04□□□□□ -1.92
VPS41-212ENST00000482217 GRIN2AQ12879 1464 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 CHD4Q14839 1912 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 DISP2A7MBM2 1401 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 KIF13AQ9H1H9 1805 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 TRAV9-2A0A087WT02 112 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 A0A087X002 238 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 IGKV1D-43A0A0B4J1Z2 117 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 ZNF670-ZNF695F2Z2N8 137 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 LGALS9O00182 355 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 APOMO95445 188 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 UCHL1P09936 223 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 P0DMU3 169 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 FAM231AP0DMU4 169 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 FAM231CP0DMU5 169 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 OPRK1P41145 380 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 NDUFA6P56556 154 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 SYNJ2BPP57105 145 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
VPS41-212ENST00000482217 BTG2P78543 158 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 HSD52Q0P140 79 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 UBE2NLQ5JXB2 153 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 MOB1BQ7L9L4 216 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 ZNF429Q86V71 674 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 GKN2Q86XP6 184 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 SAXO1Q8IYX7 474 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 SGMS2Q8NHU3 365 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 DEDD2Q8WXF8 326 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 GNPNAT1Q96EK6 184 aaPredicted RBP3.03□□□□□ -1.92
VPS41-212ENST00000482217 AP1S3Q96PC3 154 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 SDF2Q99470 211 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 EIF5A2Q9GZV4 153 aaKnown RBP3.03□□□□□ -1.92
VPS41-212ENST00000482217 AICDAQ9GZX7 198 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 TMEM133Q9H2Q1 129 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 CA10Q9NS85 328 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 AIG1Q9NVV5 245 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 EML6Q6ZMW3 1958 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 THOC2Q8NI27 1593 aaKnown RBP3.03□□□□□ -1.92
VPS41-212ENST00000482217 KDM5DQ9BY66 1539 aa3.03□□□□□ -1.92
VPS41-212ENST00000482217 N4BP2Q86UW6 1770 aaPredicted RBP3.02□□□□□ -1.93
VPS41-212ENST00000482217 TET2Q6N021 2002 aaPredicted RBP3.02□□□□□ -1.93
VPS41-212ENST00000482217 NUP205Q92621 2012 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 THSD7BQ9C0I4 1608 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 ALPK3Q96L96 1907 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 IGKV6-21A0A0C4DH24 114 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 FAM236AA0A1B0GUQ0 79 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 FAM236BA0A1B0GV22 79 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 TMEM269A0A1B0GVZ9 245 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 ODAMA1E959 279 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 IZUMO1RA6ND01 250 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 GGT3PA6NGU5 568 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 GGTLC3B5MD39 225 aa3.02□□□□□ -1.93
VPS41-212ENST00000482217 COX7A2LO14548 114 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms