RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 FAM78BQ5VT40 261 aa0.3□□□□□ -2.36
KDM1A-204ENST00000481879 KRTAP19-3Q7Z4W3 81 aa0.3□□□□□ -2.36
KDM1A-204ENST00000481879 ANKRD7Q92527 254 aa0.3□□□□□ -2.36
KDM1A-204ENST00000481879 SERPINI1Q99574 410 aa0.3□□□□□ -2.36
KDM1A-204ENST00000481879 DCUN1D5Q9BTE7 237 aa0.3□□□□□ -2.36
KDM1A-204ENST00000481879 WDR54Q9H977 334 aa0.3□□□□□ -2.36
KDM1A-204ENST00000481879 PAQR5Q9NXK6 330 aaPredicted RBP0.3□□□□□ -2.36
KDM1A-204ENST00000481879 DKKL1Q9UK85 242 aa0.3□□□□□ -2.36
KDM1A-204ENST00000481879 PXMP4Q9Y6I8 212 aa0.3□□□□□ -2.36
KDM1A-204ENST00000481879 ATAD5Q96QE3 1844 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 MYO5BQ9ULV0 1848 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 TRAV14DV4A0A0A6YYC5 116 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 C1orf232A0A0U1RR37 186 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 GGT3PA6NGU5 568 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 HSBP1L1C9JCN9 74 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 SLC22A1O15245 554 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 MSMBP08118 114 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 DDTP30046 118 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 HAAOP46952 286 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 EIF2B2P49770 351 aaKnown RBP0.29□□□□□ -2.36
KDM1A-204ENST00000481879 OR4D2P58180 307 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 UBE2G2P60604 165 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 KISS1Q15726 138 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 OR7G1Q8NGA0 311 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 AQP3Q92482 292 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 SMIM19Q96E16 107 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 C7orf50Q9BRJ6 194 aaKnown RBP0.29□□□□□ -2.36
KDM1A-204ENST00000481879 TRABDQ9H4I3 376 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 XAGE1AQ9HD64 81 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 AK3Q9UIJ7 227 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 KIF15Q9NS87 1388 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 ARFGEF3Q5TH69 2177 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 INTS1Q8N201 2190 aaKnown RBP0.29□□□□□ -2.36
KDM1A-204ENST00000481879 RIMS2Q9UQ26 1411 aa0.29□□□□□ -2.36
KDM1A-204ENST00000481879 ERICH2A1L162 156 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 EVPLLA8MZ36 301 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 COCHO43405 550 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 YEATS4O95619 227 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 TYMSP04818 313 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 FXYD2P54710 66 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 RPL18Q07020 188 aaKnown RBP0.28□□□□□ -2.36
KDM1A-204ENST00000481879 COMMD7Q86VX2 200 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 TMEM161BQ8NDZ6 487 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 JOSD2Q8TAC2 188 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 KCTD7Q96MP8 289 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 DHRS9Q9BPW9 319 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 YIPF3Q9GZM5 350 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 MAP1LC3AQ9H492 121 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 RSL24D1Q9UHA3 163 aaKnown RBP0.28□□□□□ -2.36
KDM1A-204ENST00000481879 FUT9Q9Y231 359 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 SLX4Q8IY92 1834 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 TTC21AQ8NDW8 1320 aa0.28□□□□□ -2.36
KDM1A-204ENST00000481879 IGHV1-69-2A0A0G2JMI3 117 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 OR4C45A6NMZ5 311 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 CALUO43852 315 aaPredicted RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 IGHV3-7P01780 117 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 SRP19P09132 144 aaKnown RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 METTL15P1P0C7V9 234 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 ZNF93P35789 620 aaPredicted RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 MAP2K4P45985 399 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 CDC34P49427 236 aaPredicted RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 SKP1P63208 163 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 UBE2IP63279 158 aaKnown RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 MGAT3Q09327 533 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 FABP9Q0Z7S8 132 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 CDK10Q15131 360 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 RSU1Q15404 277 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 TEX36Q5VZQ5 186 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 CST9Q5W186 159 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 TNFAIP8L2Q6P589 184 aaPredicted RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 C12orf29Q8N999 325 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 WFDC11Q8NEX6 87 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 CMTM5Q96DZ9 223 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 OBSCN-AS1Q96MR7 158 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 UPF3BQ9BZI7 483 aaKnown RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 CHMP4BQ9H444 224 aaKnown RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 SPACA1Q9HBV2 294 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 SPANXB1Q9NS25 103 aaPredicted RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 CISHQ9NSE2 258 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 OR5AC2Q9NZP5 309 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 ZFP30Q9Y2G7 519 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 POLR1DQ9Y2S0 133 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 C15orf41Q9Y2V0 281 aa0.27□□□□□ -2.37
KDM1A-204ENST00000481879 NUP153P49790 1475 aaKnown RBP0.27□□□□□ -2.37
KDM1A-204ENST00000481879 NCOA6Q14686 2063 aaPredicted RBP0.26□□□□□ -2.37
KDM1A-204ENST00000481879 TRBV6-7A0A0A0MS04 114 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 C21orf140B9A014 251 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 GOLGA8KD6RF30 607 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 GOLGA8MH3BSY2 632 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 PFDN6O15212 129 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 SHBGP04278 402 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 KRT7P08729 469 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 KCNE1P15382 129 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 RPS4Y1P22090 263 aaKnown RBP0.26□□□□□ -2.37
KDM1A-204ENST00000481879 PSMB6P28072 239 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 MAP3K7CLP57077 242 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 NDUFA5Q16718 116 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 KRTAP21-1Q3LI58 79 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 C5orf46Q6UWT4 87 aa0.26□□□□□ -2.37
KDM1A-204ENST00000481879 LCN15Q6UWW0 184 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms