RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 GIMAP1Q8WWP7 306 aa14.01□□□□□ -0.17
CLK1-211ENST00000481641 NEURL2Q9BR09 285 aa14.01□□□□□ -0.17
CLK1-211ENST00000481641 WFDC10AQ9H1F0 79 aa14.01□□□□□ -0.17
CLK1-211ENST00000481641 ZC4H2Q9NQZ6 224 aa14.01□□□□□ -0.17
CLK1-211ENST00000481641 BET1LQ9NYM9 111 aa14.01□□□□□ -0.17
CLK1-211ENST00000481641 CSMD3Q7Z407 3707 aa14.01□□□□□ -0.17
CLK1-211ENST00000481641 RYR2Q92736 4967 aa14□□□□□ -0.17
CLK1-211ENST00000481641 MFSD2BA6NFX1 497 aa14□□□□□ -0.17
CLK1-211ENST00000481641 RPS19P39019 145 aaKnown RBP14□□□□□ -0.17
CLK1-211ENST00000481641 OR2B8PP59922 312 aa14□□□□□ -0.17
CLK1-211ENST00000481641 GUCA2BQ16661 112 aa14□□□□□ -0.17
CLK1-211ENST00000481641 DEFB125Q8N687 156 aa14□□□□□ -0.17
CLK1-211ENST00000481641 OR4A5Q8NH83 315 aa14□□□□□ -0.17
CLK1-211ENST00000481641 IFT46Q9NQC8 304 aa14□□□□□ -0.17
CLK1-211ENST00000481641 IGLV11-55A0A075B6I3 123 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 UPK2O00526 184 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 RBFOX2O43251 390 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLK1-211ENST00000481641 XRCC3O43542 346 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 S1PR2O95136 353 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 HPRT1P00492 218 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 DEFA4P12838 97 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 CBX5P45973 191 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 RFX2P48378 723 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 CATR1Q13166 79 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 AADACL3Q5VUY0 350 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 GPHB5Q86YW7 130 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 EEF1AKMT3Q96AZ1 226 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 ISOC1Q96CN7 298 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 WDR89Q96FK6 387 aaPredicted RBP13.99□□□□□ -0.17
CLK1-211ENST00000481641 EHFQ9NZC4 300 aa13.99□□□□□ -0.17
CLK1-211ENST00000481641 ZNF320A2RRD8 509 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 LGALS9O00182 355 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 TPPPO94811 219 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 DHFRP00374 187 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 PMP2P02689 132 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 NQO2P16083 231 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 GNRHRP30968 328 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 TAS2R31P59538 309 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 HERV-K104P61576 105 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 KLK9Q2XQG4 91 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 FAM209BQ5JX69 171 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 LINC00322Q6ZN03 302 aaPredicted RBP13.98□□□□□ -0.17
CLK1-211ENST00000481641 YIPF6Q96EC8 236 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 S100A16Q96FQ6 103 aaKnown RBP13.98□□□□□ -0.17
CLK1-211ENST00000481641 FAM110AQ9BQ89 295 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 TMEM140Q9NV12 185 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 KLK9Q9UKQ9 250 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 CEPT1Q9Y6K0 416 aa13.98□□□□□ -0.17
CLK1-211ENST00000481641 IGLC7A0M8Q6 106 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 RBMY1BA6NDE4 496 aaKnown RBP13.97□□□□□ -0.17
CLK1-211ENST00000481641 RBMY1EA6NEQ0 496 aaKnown RBP13.97□□□□□ -0.17
CLK1-211ENST00000481641 RBMY1DP0C7P1 496 aaKnown RBP13.97□□□□□ -0.17
CLK1-211ENST00000481641 HIST1H1BP16401 226 aaKnown RBP13.97□□□□□ -0.17
CLK1-211ENST00000481641 CBLN1P23435 193 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 TAS2R20P59543 309 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 POU2AF1Q16633 256 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 UBE2NLQ5JXB2 153 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 SAMD12Q8N8I0 201 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 DMBX1Q8NFW5 382 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 OR10W1Q8NGF6 305 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 AIFM2Q9BRQ8 373 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 ZNF2Q9BSG1 426 aaPredicted RBP13.97□□□□□ -0.17
CLK1-211ENST00000481641 SLC2A8Q9NY64 477 aa13.97□□□□□ -0.17
CLK1-211ENST00000481641 IGHV3-35A0A0C4DH35 117 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 TMEM213A2RRL7 107 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 CLEC3BP05452 202 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 FAM106AQ4KMX7 169 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 TMEM69Q5SWH9 247 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 LAX1Q8IWV1 398 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 COMMD5Q9GZQ3 224 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 HIPK2Q9H2X6 1198 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 SRD5A3Q9H8P0 318 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 TECRQ9NZ01 308 aaKnown RBP13.96□□□□□ -0.17
CLK1-211ENST00000481641 MLXQ9UH92 298 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 ANAPC10Q9UM13 185 aa13.96□□□□□ -0.17
CLK1-211ENST00000481641 OR11H12B2RN74 326 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 TMEM127O75204 238 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 PGLYRP1O75594 196 aaPredicted RBP13.95□□□□□ -0.18
CLK1-211ENST00000481641 RLN1P04808 185 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 IFNA6P05013 189 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 GPR183P32249 361 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 TM4SF20Q53R12 229 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 DHRS11Q6UWP2 260 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 UNQ9165/PRO28630Q6UXU0 137 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 CROCCP3Q8IVE0 287 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 TMEM61Q8N0U2 210 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 UXS1Q8NBZ7 420 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 MOB3AQ96BX8 217 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 LYSTQ99698 3801 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 PLEKHA2Q9HB19 425 aa13.95□□□□□ -0.18
CLK1-211ENST00000481641 TRBV7-1A0A0A6YYK4 115 aa13.94□□□□□ -0.18
CLK1-211ENST00000481641 TEX50A0A1B0GTY4 177 aa13.94□□□□□ -0.18
CLK1-211ENST00000481641 LPAR6P43657 344 aa13.94□□□□□ -0.18
CLK1-211ENST00000481641 ZNF57Q68EA5 555 aaPredicted RBP13.94□□□□□ -0.18
CLK1-211ENST00000481641 ZNF502Q8TBZ5 544 aa13.94□□□□□ -0.18
CLK1-211ENST00000481641 CD300LFQ8TDQ1 290 aa13.94□□□□□ -0.18
CLK1-211ENST00000481641 CXorf58Q96LI9 332 aa13.94□□□□□ -0.18
CLK1-211ENST00000481641 QTRT1Q9BXR0 403 aaKnown RBP13.94□□□□□ -0.18
CLK1-211ENST00000481641 FXYD6Q9H0Q3 95 aa13.94□□□□□ -0.18
CLK1-211ENST00000481641 NSG2Q9Y328 171 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms