RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 FAM223BA6NKX1 122 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 LINC00473A8K010 186 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 H7C2Y5 167 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 M0R1X1 148 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 GSTZ1O43708 216 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-213ENST00000480102 DHFRP00374 187 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 CRYGCP07315 174 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 OR8U8P0C7N1 319 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF735P0CB33 412 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 IGKV1-13P0DP09 117 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 NQO2P16083 231 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 ELK1P19419 428 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 F2RP25116 425 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 GNRHRP30968 328 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 FCGR2CP31995 323 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 ETV6P41212 452 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 RAB9AP51151 201 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 BRWD1-AS2P59051 145 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 SSBP2P81877 361 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-213ENST00000480102 NDPQ00604 133 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 HNF4GQ14541 408 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 MEF2DQ14814 521 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 MRGPRG-AS1Q2M3A8 158 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 FAM53AQ6NSI3 398 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-213ENST00000480102 TMEM17Q86X19 198 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 FAM223AQ8IWN6 122 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 SLC38A6Q8IZM9 456 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 TTC9CQ8N5M4 171 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF491Q8N8L2 437 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 POC5Q8NA72 575 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 TMEM229BQ8NBD8 167 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 OR1L6Q8NGR2 347 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 OR5B3Q8NH48 314 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 UBALD1Q8TB05 177 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 SMIM4Q8WVI0 70 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 C5orf30Q96GV9 206 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 RITA1Q96K30 269 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 HARBI1Q96MB7 349 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 HSPB9Q9BQS6 159 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 SLIRPQ9GZT3 109 aaKnown RBP3.8□□□□□ -1.8
PTCD3-213ENST00000480102 RBM38Q9H0Z9 239 aaKnown RBP3.8□□□□□ -1.8
PTCD3-213ENST00000480102 FKBP11Q9NYL4 201 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 RSL24D1Q9UHA3 163 aaKnown RBP3.8□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF257Q9Y2Q1 563 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 RBM7Q9Y580 266 aaKnown RBP3.8□□□□□ -1.8
PTCD3-213ENST00000480102 COX11Q9Y6N1 276 aa3.8□□□□□ -1.8
PTCD3-213ENST00000480102 SRRM4A7MD48 611 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 H3BMQ9 156 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 CCL24O00175 119 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 GPR31O00270 319 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 ATP6V0E1O15342 81 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 TRIAP1O43715 76 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 NOL3O60936 208 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 ACTL6BO94805 426 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 ATG12O94817 140 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 OR2A4O95047 310 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 CA2P00918 260 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 EIF4EP06730 217 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 LGALS1P09382 135 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 HIST1H1BP16401 226 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 ZP3P21754 424 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 NFYAP23511 347 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 PSMB6P28072 239 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 FCGR2BP31994 310 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 TAS2R19P59542 299 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 RPL8P62917 257 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 SRSF4Q08170 494 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 FXYD3Q14802 87 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 PDLIM3Q53GG5 364 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 TMEM65Q6PI78 240 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 ZNF429Q86V71 674 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 CCDC28AQ8IWP9 274 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 GVQW1Q8N7I0 195 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 NECAP1Q8NC96 275 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 OR5H2Q8NGV7 314 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 TERB2Q8NHR7 220 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 FAM110DQ8TAY7 271 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 FCAMRQ8WWV6 532 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 TAF15Q92804 592 aaKnown RBP eCLIP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 ISOC1Q96CN7 298 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 DGCR14Q96DF8 476 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 CYYR1Q96J86 154 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 NOL4LQ96MY1 436 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 OR2A7Q96R45 310 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 ABHD1Q96SE0 405 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 FBXL15Q9H469 300 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 SEPSECSQ9HD40 501 aaKnown RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 RANGRFQ9HD47 186 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 IFT46Q9NQC8 304 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 SLC2A9Q9NRM0 540 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 COMMD3Q9UBI1 195 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 ELF5Q9UKW6 265 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-213ENST00000480102 CEPT1Q9Y6K0 416 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 DSCAML1Q8TD84 2053 aa3.79□□□□□ -1.8
PTCD3-213ENST00000480102 LINC01548A6NM66 108 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 F5H697 171 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 H0Y980 276 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 FCN1O00602 326 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 CYB5BO43169 146 aa3.78□□□□□ -1.8
PTCD3-213ENST00000480102 SLC25A17O43808 307 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms