RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 VAMP8Q9BV40 100 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 TET2Q6N021 2002 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 CACNA1GO43497 2377 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 FOXF2Q12947 444 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 CATR1Q13166 79 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 BAGE3Q86Y29 109 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 BAGE2Q86Y30 109 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 FDCSPQ8NFU4 85 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 OR5AU1Q8NGC0 362 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 KLF14Q8TD94 323 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 RAB1CQ92928 201 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 DCTN5Q9BTE1 182 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 LRFN3Q9BTN0 628 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 KCNIP1Q9NZI2 227 aa11.03□□□□□ -0.64
PDZRN3-208ENST00000479530 FCN1O00602 326 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 IL6RP08887 468 aaPredicted RBP11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 STAG3L2P0CL84 134 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 STAG3L3P0CL85 134 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 LTC4SQ16873 150 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 OR1L6Q8NGR2 347 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 COQ2Q96H96 371 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 MS4A5Q9H3V2 200 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 SEPSECSQ9HD40 501 aaKnown RBP11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 OBP2BQ9NPH6 170 aa11.02□□□□□ -0.64
PDZRN3-208ENST00000479530 ATMQ13315 3056 aa11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 FOXH1O75593 365 aa11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 PAFAH1B2P68402 229 aa11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 GABRA6Q16445 453 aa11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 Q8N976 141 aa11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 NANOS1Q8WY41 292 aaKnown RBP11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 C1orf159Q96HA4 380 aa11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 PSG11Q9UQ72 335 aa11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 PTPRBP23467 1997 aa11.02□□□□□ -0.65
PDZRN3-208ENST00000479530 SNURFLB1AK76 121 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 ESDP10768 282 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 GABRA2P47869 451 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 FABP6P51161 128 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 KRTDAPP60985 99 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 SLC35B1P78383 322 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 KIAA1644Q3SXP7 199 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 ZBTB34Q8NCN2 500 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 ST6GALNAC3Q8NDV1 305 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 GGTLC1Q9BX51 225 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 FAM234AQ9H0X4 552 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 IL36BQ9NZH7 164 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 ICE1Q9Y2F5 2266 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 ADGRG4Q8IZF6 3080 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 TMEM30CPA0ZSE6 113 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 PROP1O75360 226 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 TMEM11P17152 192 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 MMDQ15546 238 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 ZNF718Q3SXZ3 478 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 ABHD12Q8N2K0 398 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 Q8TCH9 128 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 GMPPAQ96IJ6 420 aaPredicted RBP11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 BTF3L4Q96K17 158 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 GNB4Q9HAV0 340 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 POLDIP2Q9Y2S7 368 aa11.01□□□□□ -0.65
PDZRN3-208ENST00000479530 TRAV3A0A0B4J244 114 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 IGHV3-13P01766 116 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 IGHV3-7P01780 117 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 LGALS4P56470 323 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 TMEM249Q2WGJ8 235 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 C9orf106Q8NAJ2 232 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 NINJ1Q92982 152 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 RCHY1Q96PM5 261 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 PRSS47A8MTI9 375 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 KIR2DL2P43627 348 aaPredicted RBP11□□□□□ -0.65
PDZRN3-208ENST00000479530 PDLIM3Q53GG5 364 aaPredicted RBP11□□□□□ -0.65
PDZRN3-208ENST00000479530 Q8IYB0 196 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 OR8I2Q8N0Y5 310 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 WDR31Q8NA23 367 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 OR13A1Q8NGR1 328 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 CLCF1Q9UBD9 225 aa11□□□□□ -0.65
PDZRN3-208ENST00000479530 OPRK1P41145 380 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 RANP62826 216 aaKnown RBP10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 PRSS46E5RG02 174 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 FCGR3BO75015 233 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 CXorf1O96002 111 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 FAM214BQ7L5A3 538 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 MMD2Q8IY49 270 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 OTOGLQ3ZCN5 2332 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 SPAARA0A1B0GVQ0 90 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 OOEPA6NGQ2 149 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 IQCF6A8MYZ5 107 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 GPX1P07203 203 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 RBX1P62877 108 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 MAJINQ3KP22 176 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 TAAR6Q96RI8 345 aa10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 HEYLQ9NQ87 328 aaPredicted RBP10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 TBL2Q9Y4P3 447 aaKnown RBP10.99□□□□□ -0.65
PDZRN3-208ENST00000479530 CEP250Q9BV73 2442 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 AHRRA9YTQ3 701 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 GCHFRP30047 84 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 SPRNQ5BIV9 151 aa10.98□□□□□ -0.65
PDZRN3-208ENST00000479530 STPG4Q8N801 248 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms