RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 CTRB2Q6GPI1 263 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 SLC25A42Q86VD7 318 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 OR5AP2Q8NGF4 316 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 EDA2RQ9HAV5 297 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 ZNF320A2RRD8 509 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 A8MZ25 164 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 AIREO43918 545 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 GGCTO75223 188 aaKnown RBP13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 RLN1P04808 185 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 DEFA4P12838 97 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 TAS2R20P59543 309 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 HERV-K104P61576 105 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 DEFB114Q30KQ6 69 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 SAMD12Q8N8I0 201 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 DMBX1Q8NFW5 382 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 ZNF2Q9BSG1 426 aaPredicted RBP13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 FXYD6Q9H0Q3 95 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 TMEM140Q9NV12 185 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 SIGLEC8Q9NYZ4 499 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 NSG2Q9Y328 171 aa13.11□□□□□ -0.31
ECHDC1-216ENST00000479525 RBMY1BA6NDE4 496 aaKnown RBP13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 RBMY1EA6NEQ0 496 aaKnown RBP13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 UPK2O00526 184 aa13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 RBMY1DP0C7P1 496 aaKnown RBP13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 MAS1LP35410 378 aa13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 KIR2DS2P43631 304 aa13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 SCAND1P57086 179 aa13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 OR2B8PP59922 312 aa13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 YIPF6Q96EC8 236 aa13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 SPATA25Q9BR10 227 aa13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 BET1LQ9NYM9 111 aa13.1□□□□□ -0.31
ECHDC1-216ENST00000479525 IGLV11-55A0A075B6I3 123 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 XRCC3O43542 346 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 SCAF4O95104 1147 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 EIF4EP06730 217 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 CRYGCP07315 174 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 GNRHRP30968 328 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 GPR183P32249 361 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 CATR1Q13166 79 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 TM4SF20Q53R12 229 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 RNASE12Q5GAN4 147 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 UBE2NLQ5JXB2 153 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 TMEM69Q5SWH9 247 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 UNQ9165/PRO28630Q6UXU0 137 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 ISOC1Q96CN7 298 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 KCTD12Q96CX2 325 aaKnown RBP13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 HINT2Q9BX68 163 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 SRD5A3Q9H8P0 318 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 MLXQ9UH92 298 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 CEPT1Q9Y6K0 416 aa13.09□□□□□ -0.31
ECHDC1-216ENST00000479525 A0A0A6YYH2 397 aa13.08□□□□□ -0.31
ECHDC1-216ENST00000479525 IGLC7A0M8Q6 106 aa13.08□□□□□ -0.31
ECHDC1-216ENST00000479525 TMEM213A2RRL7 107 aa13.08□□□□□ -0.31
ECHDC1-216ENST00000479525 A6NJ64 397 aa13.08□□□□□ -0.31
ECHDC1-216ENST00000479525 TPPPO94811 219 aa13.08□□□□□ -0.31
ECHDC1-216ENST00000479525 HPRT1P00492 218 aa13.08□□□□□ -0.31
ECHDC1-216ENST00000479525 GIMAP1Q8WWP7 306 aa13.08□□□□□ -0.31
ECHDC1-216ENST00000479525 S100A16Q96FQ6 103 aaKnown RBP13.08□□□□□ -0.31
ECHDC1-216ENST00000479525 IGHV3OR16-8A0A075B7F1 116 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 OR11H12B2RN74 326 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 CLEC3BP05452 202 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 NQO2P16083 231 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 CBLN1P23435 193 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 CBX5P45973 191 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 TAS2R31P59538 309 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 NCS1P62166 190 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 PHLDA2Q53GA4 152 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 BTNL8Q6UX41 500 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 TMEM61Q8N0U2 210 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 UXS1Q8NBZ7 420 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 COMMD3Q9UBI1 195 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 G6PCP35575 357 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 LPAR6P43657 344 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 ZBTB34Q8NCN2 500 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 TSPAN14Q8NG11 270 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 OR5H2Q8NGV7 314 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 FCAMRQ8WWV6 532 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 COMMD5Q9GZQ3 224 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 HIPK2Q9H2X6 1198 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 SLC2A8Q9NY64 477 aa13.07□□□□□ -0.32
ECHDC1-216ENST00000479525 TEX50A0A1B0GTY4 177 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 PGLYRP1O75594 196 aaPredicted RBP13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 KRASP01116 189 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 OR13C7P0DN81 318 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 HRH1P35367 487 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 MFAP2P55001 183 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 VBP1P61758 197 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 WT1-ASQ06250 92 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 GPHB5Q86YW7 130 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 SNX29P2Q8IUI4 249 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 OR2K2Q8NGT1 345 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 OR4A5Q8NH83 315 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 MOB3AQ96BX8 217 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 ANAPC10Q9UM13 185 aa13.06□□□□□ -0.32
ECHDC1-216ENST00000479525 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 OR2T8A6NH00 312 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms