RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MED12LQ86YW9 2145 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 SMIM27A0A1W2PRY6 76 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 C9orf118A6NHY6 69 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 HLA-DRB1P01911 266 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 SRFP11831 508 aa17.67■□□□□ 0.42
SDF4-206ENST00000478938 SSBP3Q9BWW4 388 aaPredicted RBP17.67■□□□□ 0.42
SDF4-206ENST00000478938 COL5A1P20908 1838 aaPredicted RBP17.67■□□□□ 0.42
SDF4-206ENST00000478938 IGHV5-51A0A0C4DH38 117 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 CDIPTO14735 213 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 CRYBA4P53673 196 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 GFERP55789 205 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 RPL24P83731 157 aaKnown RBP17.66■□□□□ 0.42
SDF4-206ENST00000478938 MEF2CQ06413 473 aaPredicted RBP17.66■□□□□ 0.42
SDF4-206ENST00000478938 SLC23A3Q6PIS1 610 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 Q6ZSR6 202 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 DRAM1Q8N682 238 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 SAP30LQ9HAJ7 183 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 OSTCQ9NRP0 149 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 H0Y8G0 127 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 RBMXL2O75526 392 aaKnown RBP17.66■□□□□ 0.42
SDF4-206ENST00000478938 PET117Q6UWS5 81 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 FAM168AQ92567 244 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 TMEM54Q969K7 222 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 FGF23Q9GZV9 251 aaPredicted RBP17.66■□□□□ 0.42
SDF4-206ENST00000478938 ZNF391Q9UJN7 358 aa17.66■□□□□ 0.42
SDF4-206ENST00000478938 HELTA6NFD8 242 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 AGFG2O95081 481 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 OR2K2Q8NGT1 345 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 PERPQ96FX8 193 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 PMCHL2Q9BQD1 86 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 RPP25Q9BUL9 199 aaKnown RBP17.65■□□□□ 0.42
SDF4-206ENST00000478938 PSG11Q9UQ72 335 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 KMT2EQ8IZD2 1858 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 TEX48A0A1B0GUV7 120 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 IZUMO1RA6ND01 250 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 TRAPPC2LH3BP13 241 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 CRXO43186 299 aaPredicted RBP17.65■□□□□ 0.42
SDF4-206ENST00000478938 ZNHIT1O43257 154 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 GPM6AP51674 278 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.65■□□□□ 0.42
SDF4-206ENST00000478938 USF3Q68DE3 2245 aa17.65■□□□□ 0.42
SDF4-206ENST00000478938 SPAARA0A1B0GVQ0 90 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 C15orf62A8K5M9 175 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 KLF5Q13887 457 aaPredicted RBP17.64■□□□□ 0.41
SDF4-206ENST00000478938 PSG3Q16557 428 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 IBA57Q5T440 356 aaKnown RBP17.64■□□□□ 0.41
SDF4-206ENST00000478938 SSMEM1Q8WWF3 244 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 SPSB4Q96A44 273 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 ZNF488Q96MN9 340 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 HILPDAQ9Y5L2 63 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 PDLIM3Q53GG5 364 aaPredicted RBP17.64■□□□□ 0.41
SDF4-206ENST00000478938 TMEM97Q5BJF2 176 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 OR13H1Q8NG92 308 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 OR10AG1Q8NH19 301 aa17.64■□□□□ 0.41
SDF4-206ENST00000478938 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.63■□□□□ 0.41
SDF4-206ENST00000478938 LINC00271P0C7V0 271 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 MC5RP33032 325 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 MFAP2P55001 183 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 CKS1BP61024 79 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 SEC11AP67812 179 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 SPATA46Q5T0L3 261 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 SLC22A18ASQ8N1D0 253 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 MGST2Q99735 147 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 RUNX3Q13761 415 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 NHLRC2Q8NBF2 726 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 PHF7Q9BWX1 381 aaPredicted RBP17.63■□□□□ 0.41
SDF4-206ENST00000478938 TMEM191AQ9H0A3 160 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 RNF208Q9H0X6 261 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 JKAMPQ9P055 326 aa17.63■□□□□ 0.41
SDF4-206ENST00000478938 RHBDL1O75783 438 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 HIST1H1EP10412 219 aaKnown RBP17.62■□□□□ 0.41
SDF4-206ENST00000478938 COL9A1P20849 921 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 OPRK1P41145 380 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 TIGITQ495A1 244 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 ZNF48Q96MX3 618 aaPredicted RBP17.62■□□□□ 0.41
SDF4-206ENST00000478938 UCN2Q96RP3 112 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 A0A0G2JLM5 398 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 ZNF207O43670 478 aaKnown RBP17.62■□□□□ 0.41
SDF4-206ENST00000478938 P0C879 139 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 HSD52Q0P140 79 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 SLC25A53Q5H9E4 307 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 RAB37Q96AX2 223 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 GGTLC1Q9BX51 225 aa17.62■□□□□ 0.41
SDF4-206ENST00000478938 CABIN1Q9Y6J0 2220 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.61■□□□□ 0.41
SDF4-206ENST00000478938 IGHV1-24A0A0C4DH33 117 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 A6NJY4 79 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 ISLRO14498 428 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 SMIM17P0DL12 118 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 ZNF32P17041 273 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 FBLP22087 321 aaKnown RBP17.61■□□□□ 0.41
SDF4-206ENST00000478938 FAM27BQ5VT28 67 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 TREML4Q6UXN2 200 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 SSX8Q7RTT4 187 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 ABCA7Q8IZY2 2146 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 LRP4O75096 1905 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 F2RL2O00254 374 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 HBZP02008 142 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 BPIFA4PQ86YQ2 179 aa17.61■□□□□ 0.41
SDF4-206ENST00000478938 TMEM251Q8N6I4 163 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms