RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 KLK12Q9UKR0 248 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 PSG11Q9UQ72 335 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 ST3GAL6Q9Y274 331 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 POLDIP2Q9Y2S7 368 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 PRELID3BQ9Y3B1 194 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 FLVCR1Q9Y5Y0 555 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 GMEB1Q9Y692 573 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 LHFPL6Q9Y693 200 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 CHCHD2Q9Y6H1 151 aaPredicted RBP0.94□□□□□ -2.26
SRRM1-211ENST00000478890 U3KQA8 63 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 SPTBN1Q01082 2364 aaKnown RBP0.94□□□□□ -2.26
SRRM1-211ENST00000478890 RALGAPA1Q6GYQ0 2036 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 ALPK2Q86TB3 2170 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 MED12Q93074 2177 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 ROS1P08922 2347 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 FLNBO75369 2602 aaKnown RBP0.94□□□□□ -2.26
SRRM1-211ENST00000478890 COL4A4P53420 1690 aaPredicted RBP0.94□□□□□ -2.26
SRRM1-211ENST00000478890 LTBP2Q14767 1821 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 KIAA1671Q9BY89 1806 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 C2orf16Q68DN1 1984 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 COL6A6A6NMZ7 2263 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 ABCA12Q86UK0 2595 aa0.94□□□□□ -2.26
SRRM1-211ENST00000478890 LAMA2P24043 3122 aaKnown RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 ZNF462Q96JM2 2506 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 DNAJC13O75165 2243 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 MDC1Q14676 2089 aaKnown RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 HEATR5BQ9P2D3 2071 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 TACC2O95359 2948 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 ITPR1Q14643 2758 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 HECTD1Q9ULT8 2610 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 CACNA1BQ00975 2339 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 FANCMQ8IYD8 2048 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 PLXNA2O75051 1894 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 NUP210Q8TEM1 1887 aaPredicted RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 CHD6Q8TD26 2715 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 SPG11Q96JI7 2443 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 ARID1AO14497 2285 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 ICE1Q9Y2F5 2266 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 IGLV3-12A0A075B6K2 115 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 PPIAL4EA0A075B759 164 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 IGHV3-43A0A0B4J1X8 118 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 IGHV2OR16-5A0A0B4J2B6 119 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 PIGBOS1A0A0B4J2F0 54 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 A0A0D9SG52 128 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 IGHV1-69-2A0A0G2JMI3 117 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 LOC100131303A0A0U1RQF7 123 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 KIR2DS1A0A191URI9 304 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 C3orf85A0A1B0GTC6 90 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 A0A1B0GUH1 482 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 A0A1W2PPV4 95 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 NKX2-6A6NCS4 301 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 RBMY1BA6NDE4 496 aaKnown RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 RBMY1EA6NEQ0 496 aaKnown RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 OR5H1A6NKK0 313 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 OR5B21A6NL26 309 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 RFPL4AA6NLU0 287 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 ZNF716A6NP11 495 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 NCBP2LA6PVI3 153 aaKnown RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 SERPINE3A8MV23 424 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 ATP6V1G2-DDX39BF2Z307 99 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 RFPL4AL1F8VTS6 287 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 I3L521 148 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 J3QT63 122 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 K7EPK0 472 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 SULT1C2O00338 296 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 CDIPTO14735 213 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 GEMIN2O14893 280 aaKnown RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 AGPAT2O15120 278 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 TNRC18O15417 2968 aaPredicted RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 FABP7O15540 132 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 CYB5BO43169 146 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 GSTZ1O43708 216 aaPredicted RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 TRAF3IP2O43734 574 aaPredicted RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 SSSCA1O60232 199 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 RAMP3O60896 148 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 PDCD6O75340 191 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 MED6O75586 246 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 CTAG2O75638 210 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 RP2O75695 350 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 SC5DO75845 299 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 DHRS3O75911 302 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 NDUFB6O95139 128 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 TGM6O95932 706 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 HAND1O96004 215 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 CYB5R3P00387 301 aaPredicted RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 KRASP01116 189 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 IGHMP01871 453 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 APOA2P02652 100 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 GYPAP02724 150 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 TTRP02766 147 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 CLPSP04118 112 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 HPNP05981 417 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 GIPP09681 153 aaPredicted RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 CTXN2P0C2S0 81 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 OR4A8P0C604 315 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 OR4E1P0C645 316 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 RBMY1DP0C7P1 496 aaKnown RBP0.93□□□□□ -2.26
SRRM1-211ENST00000478890 P0C879 139 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 ZNF735P0CB33 412 aa0.93□□□□□ -2.26
SRRM1-211ENST00000478890 RBMY1A1P0DJD3 496 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms