RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 SC5DO75845 299 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 OR2B3O76000 313 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 LDOC1O95751 146 aaPredicted RBP-0.08□□□□□ -2.42
HPS3-205ENST00000478525 FADS2O95864 444 aaKnown RBP-0.08□□□□□ -2.42
HPS3-205ENST00000478525 PPBPP02775 128 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 HTR1AP08908 422 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 ASAH2BP0C7U1 165 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 CCL5P13501 91 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 CSN1S1P47710 185 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 DLX6P56179 175 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 LINC00313P59037 77 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 RHOGP84095 191 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 PSG9Q00887 426 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 FABP5Q01469 135 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 IFITM2Q01629 132 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 FAM74A1Q5RGS3 127 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 IBA57Q5T440 356 aaKnown RBP-0.08□□□□□ -2.42
HPS3-205ENST00000478525 FAM27BQ5VT28 67 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 LCN8Q6JVE9 175 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 DPPA3Q6W0C5 159 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 SOSTDC1Q6X4U4 206 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 ZNF826PQ6ZT77 177 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 C9orf163Q8N9P6 203 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 MCFD2Q8NI22 146 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 STOML3Q8TAV4 291 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 TEX47Q8TBZ9 253 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 LRRC20Q8TCA0 184 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 NMNAT3Q96T66 252 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 TMEM208Q9BTX3 173 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 RAB1BQ9H0U4 201 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 FAM96AQ9H5X1 160 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 WDR54Q9H977 334 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 CKLFQ9UBR5 152 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 RNF11Q9Y3C5 154 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.08□□□□□ -2.42
HPS3-205ENST00000478525 FREM3P0C091 2139 aa-0.08□□□□□ -2.42
HPS3-205ENST00000478525 PTPRFP10586 1907 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 NUP153P49790 1475 aaKnown RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 LRP1Q07954 4544 aaKnown RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 SBF1O95248 1867 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 KDM6AO15550 1401 aaPredicted RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 RIC1Q4ADV7 1423 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ABCA4P78363 2273 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 IGHV1-69-2A0A0G2JMI3 117 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 GOLGA8QA0A0J9YX86 632 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 TMEM269A0A1B0GVZ9 245 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 GGT3PA6NGU5 568 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 DISC1C4P0D8 188 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 TRAPPC2LH3BP13 241 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 K7ERQ8 282 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 M0R381 172 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 FADS1O60427 444 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 APOMO95445 188 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 TCL1BO95988 128 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 OTCP00480 354 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 APOA1P02647 267 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 SRP19P09132 144 aaKnown RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 COX6A1P12074 109 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 MIFP14174 115 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 KCNE1P15382 129 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 PTNP21246 168 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 RAB13P51153 203 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 DAPP51397 102 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ZNF80P51504 273 aaPredicted RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 AQP5P55064 265 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 RPL18Q07020 188 aaKnown RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 PDE6HQ13956 83 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 GNA13Q14344 377 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ZNF846Q147U1 533 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 SYCP1Q15431 976 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 FBXO48Q5FWF7 155 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 LPCAT4Q643R3 524 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 GLT8D1Q68CQ7 371 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ASCL4Q6XD76 172 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 RASSF6Q6ZTQ3 369 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 AHSA2Q719I0 299 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ZNF550Q7Z398 422 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ATP5L2Q7Z4Y8 100 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 SPATA24Q86W54 205 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ZGRF1Q86YA3 2104 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 LINC00311Q8N616 119 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 OR7G1Q8NGA0 311 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 OR2Y1Q8NGV0 311 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ZNF431Q8TF32 576 aaPredicted RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 RAB2BQ8WUD1 216 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 SFT2D1Q8WV19 159 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ANKRD7Q92527 254 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 CMTM5Q96DZ9 223 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 GNPNAT1Q96EK6 184 aaPredicted RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ANKRD36BP1Q96IX9 119 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 PACRGQ96M98 296 aaPredicted RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ERMAPQ96PL5 475 aaPredicted RBP-0.09□□□□□ -2.42
HPS3-205ENST00000478525 CCL13Q99616 98 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 DCSTAMPQ9H295 470 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 CXorf21Q9HAI6 301 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 SPACA1Q9HBV2 294 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 IFT46Q9NQC8 304 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 GPR84Q9NQS5 396 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 MED29Q9NX70 200 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 STMN3Q9NZ72 180 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms