RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 DEFB114Q30KQ6 69 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 ZNF57Q68EA5 555 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 CTRB2Q6GPI1 263 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 SRD5A3Q9H8P0 318 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 VCX3AQ9NNX9 186 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 COMMD9Q9P000 198 aa10.93□□□□□ -0.66
SMARCE1-209ENST00000478349 OR11H12B2RN74 326 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 AREGP15514 252 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 FXYD4P59646 89 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 KLK9Q2XQG4 91 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 AADACL3Q5VUY0 350 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 DMBX1Q8NFW5 382 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 OR5AP2Q8NGF4 316 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 GIMAP1Q8WWP7 306 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 SLC25A38Q96DW6 304 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 AUNIPQ9H7T9 357 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 PLEKHA2Q9HB19 425 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 CCL28Q9NRJ3 127 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 KLK9Q9UKQ9 250 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 UFC1Q9Y3C8 167 aa10.92□□□□□ -0.66
SMARCE1-209ENST00000478349 SULT1C2O00338 296 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 NDUFB8O95169 186 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 MYOD1P15172 320 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 CBLN1P23435 193 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 S100GP29377 79 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 TAS2R46P59540 309 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 POU2AF1Q16633 256 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 TMEM17Q86X19 198 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 CMTM1Q8IZ96 169 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 GVQW1Q8N7I0 195 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 TSPAN14Q8NG11 270 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 OR52B4Q8NGK2 314 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 S100A16Q96FQ6 103 aaKnown RBP10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 CCDC140Q96MF4 163 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 FANCD2OSQ96PS1 177 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 QTRT1Q9BXR0 403 aaKnown RBP10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 HIPK2Q9H2X6 1198 aa10.91□□□□□ -0.66
SMARCE1-209ENST00000478349 IGLV11-55A0A075B6I3 123 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 TRAV25A0A0B4J276 109 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 ZNF785A8K8V0 405 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 HLA-AP01891 365 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 CD7P09564 240 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 ELLP55199 621 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 OR2B8PP59922 312 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 NEDD8Q15843 81 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 KCTD21Q4G0X4 260 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 PLET1Q6UQ28 207 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 RBPMS2Q6ZRY4 209 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 OR5H6Q8NGV6 325 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 OR51H1Q8NH63 302 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 WDR89Q96FK6 387 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 TMEM140Q9NV12 185 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 EHFQ9NZC4 300 aa10.9□□□□□ -0.66
SMARCE1-209ENST00000478349 UPK2O00526 184 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 XRCC3O43542 346 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 REG1AP05451 166 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 CLEC2LP0C7M8 214 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 PTBP1P26599 531 aaKnown RBP eCLIP10.89□□□□□ -0.672e-22■■■■■ 51.6
SMARCE1-209ENST00000478349 BRWD1-AS2P59051 145 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 UBE2NLQ5JXB2 153 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 TMEM69Q5SWH9 247 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 ADAMTSL5Q6ZMM2 481 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 SLC38A6Q8IZM9 456 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 DEFB125Q8N687 156 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 UXS1Q8NBZ7 420 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 OR1L6Q8NGR2 347 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 VN1R17PQ8TDU5 208 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 ATP6V0BQ99437 205 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 DMRT1Q9Y5R6 373 aa10.89□□□□□ -0.67
SMARCE1-209ENST00000478349 TMEM213A2RRL7 107 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 MARCH11A6NNE9 402 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 SNAPC5O75971 98 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 CLEC3BP05452 202 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 TRAPPC2P0DI81 140 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 TRAPPC2BP0DI82 140 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 GPR183P32249 361 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 ZNF818PQ6ZRF7 136 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 C19orf35Q6ZS72 473 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 TMEM61Q8N0U2 210 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 GDPD1Q8N9F7 314 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 OR1L8Q8NGR8 309 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 OR5H2Q8NGV7 314 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 LSM10Q969L4 123 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 TSC22D3Q99576 134 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 GGTLC1Q9BX51 225 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 GAR1Q9NY12 217 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 FKBP11Q9NYL4 201 aa10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 MRPL27Q9P0M9 148 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-209ENST00000478349 RYR3Q15413 4870 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 A0A1B0GW64 132 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 IGLC7A0M8Q6 106 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 MFSD2BA6NFX1 497 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 E7EUB6 86 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 S1PR2O95136 353 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 F2RP25116 425 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 SPSB3Q6PJ21 355 aa10.87□□□□□ -0.67
SMARCE1-209ENST00000478349 BTNL8Q6UX41 500 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms