RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 CELA2AP08217 269 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 GCHFRP30047 84 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 MRPL49Q13405 166 aaKnown RBP8.17□□□□□ -1.1
COL13A1-207ENST00000478219 CEACAM16Q2WEN9 425 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 MKXQ8IYA7 352 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 NHLRC2Q8NBF2 726 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 URB1-AS1Q96HZ7 61 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 IGFLR1Q9H665 355 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.17□□□□□ -1.1
COL13A1-207ENST00000478219 HCFC1P51610 2035 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 TRGV10A0A0A0MS01 117 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 C9JCJ5 164 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 HSBP1O75506 76 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 CXorf1O96002 111 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 AMY1AP04745 511 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 CRYBB3P26998 211 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 WDR73Q6P4I2 378 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 SPSB4Q96A44 273 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 SMIM12Q96EX1 92 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
COL13A1-207ENST00000478219 MS4A5Q9H3V2 200 aa8.17□□□□□ -1.1
COL13A1-207ENST00000478219 CHCHD2Q9Y6H1 151 aaPredicted RBP8.17□□□□□ -1.1
COL13A1-207ENST00000478219 TRBV6-6A0A0A6YYG2 114 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 IGHV3-64DA0A0J9YX35 117 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 OR4C46A6NHA9 309 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 C10orf142B7Z368 130 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 ZIC3O60481 467 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 IGLC1P0CG04 106 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 CD24P25063 80 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 C9orf135Q5VTT2 229 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 FAM71F2Q6NXP2 309 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 RNASEKQ6P5S7 137 aaKnown RBP8.16□□□□□ -1.1
COL13A1-207ENST00000478219 SCCPDHQ8NBX0 429 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 FOXB1Q99853 325 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 GGTLC1Q9BX51 225 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 TNFRSF19Q9NS68 423 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 FGF21Q9NSA1 209 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 CLCF1Q9UBD9 225 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 NEURL1O76050 574 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 DKK1O94907 266 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 NGFP01138 241 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 LINC00869P0C866 280 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 USF1P22415 310 aaPredicted RBP8.16□□□□□ -1.1
COL13A1-207ENST00000478219 GNG4P50150 75 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 HOXA4Q00056 320 aaPredicted RBP8.16□□□□□ -1.1
COL13A1-207ENST00000478219 CEACAM21Q3KPI0 293 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 Q5PR19 223 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 FAM120AOSQ5T036 256 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 STPG3Q8N7X2 389 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 C11orf52Q96A22 123 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 SPACA9Q96E40 222 aaPredicted RBP8.16□□□□□ -1.1
COL13A1-207ENST00000478219 NAA38Q9BRA0 125 aaKnown RBP8.16□□□□□ -1.1
COL13A1-207ENST00000478219 C1QTNF5Q9BXJ0 243 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 ARL2-SNX15V9GYD0 113 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 DOCK10Q96BY6 2186 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 KNTC1P50748 2209 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 NPIPB11E5RHQ5 1161 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 J3QW42 95 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 SNAI2O43623 268 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 TOX4O94842 621 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 IGLV2-8P01709 118 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 HLA-DQA1P01909 254 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 SMIM21Q3B7S5 101 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 FER1L6-AS1Q8NA97 138 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 OR1B1Q8NGR6 318 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 OR2T6Q8NHC8 308 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 TMEM45BQ96B21 275 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 PRRG4Q9BZD6 226 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 SERTAD4Q9NUC0 356 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 TRAPPC2LQ9UL33 140 aa8.16□□□□□ -1.1
COL13A1-207ENST00000478219 PIGBOS1A0A0B4J2F0 54 aa8.15□□□□□ -1.1
COL13A1-207ENST00000478219 HELTA6NFD8 242 aa8.15□□□□□ -1.1
COL13A1-207ENST00000478219 M0R1X1 148 aa8.15□□□□□ -1.1
COL13A1-207ENST00000478219 MRPS21P82921 87 aaKnown RBP8.15□□□□□ -1.1
COL13A1-207ENST00000478219 EFNB3Q15768 340 aa8.15□□□□□ -1.1
COL13A1-207ENST00000478219 Q6P435 159 aa8.15□□□□□ -1.1
COL13A1-207ENST00000478219 WFDC12Q8WWY7 111 aa8.15□□□□□ -1.1
COL13A1-207ENST00000478219 FNDC4Q9H6D8 234 aaPredicted RBP8.15□□□□□ -1.1
COL13A1-207ENST00000478219 ZNF391Q9UJN7 358 aa8.15□□□□□ -1.1
COL13A1-207ENST00000478219 ZNF835Q9Y2P0 537 aa8.15□□□□□ -1.1
COL13A1-207ENST00000478219 SMIM27A0A1W2PRY6 76 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 LRP5LA4QPB2 252 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 ZNF503-AS2A6NEH8 195 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 LINC00473A8K010 186 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 ACTL6BO94805 426 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 OR9G9P0C7N8 305 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 MGST1P10620 155 aaKnown RBP8.15□□□□□ -1.11
COL13A1-207ENST00000478219 OPRK1P41145 380 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 LGALS7P47929 136 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 PDLIM3Q53GG5 364 aaPredicted RBP8.15□□□□□ -1.11
COL13A1-207ENST00000478219 FAM214BQ7L5A3 538 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 PLPPR2Q96GM1 343 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 AKIRIN1Q9H9L7 192 aaPredicted RBP8.15□□□□□ -1.11
COL13A1-207ENST00000478219 FSCN3Q9NQT6 498 aa8.15□□□□□ -1.11
COL13A1-207ENST00000478219 NCKAP5O14513 1909 aa8.14□□□□□ -1.11
COL13A1-207ENST00000478219 A0A096LPE4 126 aa8.14□□□□□ -1.11
COL13A1-207ENST00000478219 A0A1W2PPZ6 126 aa8.14□□□□□ -1.11
COL13A1-207ENST00000478219 G3V4G9 280 aa8.14□□□□□ -1.11
COL13A1-207ENST00000478219 OR10J4P0C629 311 aa8.14□□□□□ -1.11
COL13A1-207ENST00000478219 CCL3P10147 92 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms