RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 RNF2Q99496 336 aa4.47□□□□□ -1.69
USP33-208ENST00000477949 SPIN2AQ99865 258 aa4.47□□□□□ -1.69
USP33-208ENST00000477949 SPIN2BQ9BPZ2 258 aa4.47□□□□□ -1.69
USP33-208ENST00000477949 NICN1Q9BSH3 213 aa4.47□□□□□ -1.69
USP33-208ENST00000477949 TAS2R4Q9NYW5 299 aa4.47□□□□□ -1.69
USP33-208ENST00000477949 KCNIP1Q9NZI2 227 aa4.47□□□□□ -1.69
USP33-208ENST00000477949 WARS2Q9UGM6 360 aaKnown RBP4.47□□□□□ -1.69
USP33-208ENST00000477949 STEAP1Q9UHE8 339 aa4.47□□□□□ -1.69
USP33-208ENST00000477949 IGLV11-55A0A075B6I3 123 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 TRBV7-1A0A0A6YYK4 115 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 LOC102723971A0A1B0GUV8 181 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 MRPS14O60783 128 aaKnown RBP4.46□□□□□ -1.7
USP33-208ENST00000477949 ZNF780AO75290 641 aaPredicted RBP4.46□□□□□ -1.7
USP33-208ENST00000477949 BAG2O95816 211 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 NAPSAO96009 420 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 RPSAP08865 295 aaKnown RBP4.46□□□□□ -1.7
USP33-208ENST00000477949 HTR1AP08908 422 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 AREGP15514 252 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 RPA2P15927 270 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 FUT3P21217 361 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 GPR183P32249 361 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 LIPKQ5VXJ0 399 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 LEMD1Q68G75 181 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 TMEM88Q6PEY1 159 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 SSX9Q7RTT3 188 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 GID4Q8IVV7 300 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 ARHGAP24Q8N264 748 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 IL1F10Q8WWZ1 152 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 DNAJC9Q8WXX5 260 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 ACOT12Q8WYK0 555 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 EEF1AKMT3Q96AZ1 226 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 IL4I1Q96RQ9 567 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 ZNF556Q9HAH1 456 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 ARL8BQ9NVJ2 186 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 TBC1D24Q9ULP9 559 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 LRRC42Q9Y546 428 aa4.46□□□□□ -1.7
USP33-208ENST00000477949 IGHV3OR16-8A0A075B7F1 116 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 IGKV1-6A0A0C4DH72 117 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 E9PI62 339 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 K7EMT4 169 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 M0R1X1 148 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 CHEK1O14757 476 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 PDCD6O75340 191 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 CST1P01037 141 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 SAA1P0DJI8 122 aaPredicted RBP4.45□□□□□ -1.7
USP33-208ENST00000477949 NPY1RP25929 384 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 ZNF93P35789 620 aaPredicted RBP4.45□□□□□ -1.7
USP33-208ENST00000477949 TFPI2P48307 235 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 MNAT1P51948 309 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 CMC4P56277 68 aaPredicted RBP4.45□□□□□ -1.7
USP33-208ENST00000477949 DEFB131AP59861 70 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 TMED1Q13445 227 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 DDI2Q5TDH0 399 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 SLC25A42Q86VD7 318 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 CENPSQ8N2Z9 138 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.45□□□□□ -1.7
USP33-208ENST00000477949 NRBF2Q96F24 287 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 PDCD1LG2Q9BQ51 273 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 TMEM138Q9NPI0 162 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 TMEM14BQ9NUH8 114 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 PAK1IP1Q9NWT1 392 aaPredicted RBP4.45□□□□□ -1.7
USP33-208ENST00000477949 CLEC5AQ9NY25 188 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 SMPXQ9UHP9 88 aa4.45□□□□□ -1.7
USP33-208ENST00000477949 TMEM272A0A1B0GTI8 110 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 IFITM10A6NMD0 228 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 NDUFA4O00483 81 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 DYNC1I1O14576 645 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 ZNF207O43670 478 aaKnown RBP4.44□□□□□ -1.7
USP33-208ENST00000477949 ZNF735P0CB33 412 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 SPP1P10451 314 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 MGMTP16455 207 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 IGFBP3P17936 291 aaPredicted RBP4.44□□□□□ -1.7
USP33-208ENST00000477949 MS4A2Q01362 244 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 CDK10Q15131 360 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 VMA21Q3ZAQ7 101 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 PLET1Q6UQ28 207 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 DHFR2Q86XF0 187 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 DEFB107AQ8IZN7 70 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 GBGT1Q8N5D6 347 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 GIMAP1Q8WWP7 306 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 ORAI1Q96D31 301 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 SRSF8Q9BRL6 282 aaKnown RBP4.44□□□□□ -1.7
USP33-208ENST00000477949 RHPN1-AS1Q9BWJ2 59 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 PRRG3Q9BZD7 231 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 Q9H3A6 140 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 BANF2Q9H503 90 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 MSRB1Q9NZV6 116 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 ABRACLQ9P1F3 81 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 LINC00588Q9Y4M8 146 aa4.44□□□□□ -1.7
USP33-208ENST00000477949 IGKV3-7A0A075B6H7 116 aa4.43□□□□□ -1.7
USP33-208ENST00000477949 TRBV6-6A0A0A6YYG2 114 aa4.43□□□□□ -1.7
USP33-208ENST00000477949 IGHV7-4-1A0A0J9YVY3 117 aa4.43□□□□□ -1.7
USP33-208ENST00000477949 TMEM212A6NML5 194 aa4.43□□□□□ -1.7
USP33-208ENST00000477949 C15orf62A8K5M9 175 aa4.43□□□□□ -1.7
USP33-208ENST00000477949 ZNF705FA8MVS1 300 aaPredicted RBP4.43□□□□□ -1.7
USP33-208ENST00000477949 DFFBO76075 338 aa4.43□□□□□ -1.7
USP33-208ENST00000477949 FAM107AO95990 144 aa4.43□□□□□ -1.7
USP33-208ENST00000477949 ZNF705DP0CH99 300 aaPredicted RBP4.43□□□□□ -1.7
USP33-208ENST00000477949 ZNF705BP0CI00 300 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms