RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 GBGT1Q8N5D6 347 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 JAGN1Q8N5M9 183 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 SETD6Q8TBK2 473 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 TRUB1Q8WWH5 349 aaKnown RBP5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 LGALS12Q96DT0 336 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 MRPL48Q96GC5 212 aaKnown RBP5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 ZNF414Q96IQ9 312 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 C17orf77Q96MU5 243 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 OR2A7Q96R45 310 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 C20orf24Q9BUV8 137 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 OR51E2Q9H255 320 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 RIMS4Q9H426 269 aaPredicted RBP5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 CHMP1AQ9HD42 196 aaPredicted RBP5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 IMPAD1Q9NX62 359 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 CLEC5AQ9NY25 188 aa5.17□□□□□ -1.58
SPTLC1-205ENST00000477888 TRBV5-7A0A0A0MS05 114 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 IGHV7-4-1A0A0J9YVY3 117 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 PGPEP1LA6NFU8 196 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 OR2T8A6NH00 312 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 CGB1A6NKQ9 187 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 SMR3BP02814 79 aaPredicted RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 REG1AP05451 166 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 SPART-AS1P0CW21 52 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 DEFA4P12838 97 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 HTR2CP28335 458 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 DUTP33316 252 aaKnown RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 RPL27AP46776 148 aaKnown RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 RPL22L1Q6P5R6 122 aaKnown RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 FAM24BQ8N5W8 94 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 TMEM116Q8NCL8 245 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 VN1R17PQ8TDU5 208 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 BSCL2Q96G97 398 aaPredicted RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 MYCBPQ99417 103 aaPredicted RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 CIB1Q99828 191 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 HDHD3Q9BSH5 251 aaPredicted RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 SSBP4Q9BWG4 385 aaPredicted RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 OR2D2Q9H210 308 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 Q9N2K0 584 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 HEYLQ9NQ87 328 aaPredicted RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 SMPD3Q9NY59 655 aaPredicted RBP5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 PLA2G2DQ9UNK4 145 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 TMED3Q9Y3Q3 217 aa5.16□□□□□ -1.58
SPTLC1-205ENST00000477888 TRBV5-5A0A0J9YX44 114 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 NOTOA8MTQ0 251 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 KBTBD11O94819 623 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 CD3GP09693 182 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 MAS1LP35410 378 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 PSMD7P51665 324 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 RPS11P62280 158 aaKnown RBP eCLIP5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 PAFAH1B2P68402 229 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 CCDC58Q4VC31 144 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 OR10K2Q6IF99 312 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 TMEM88Q6PEY1 159 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 SPSB3Q6PJ21 355 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 VKORC1L1Q8N0U8 176 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 PUSL1Q8N0Z8 303 aaKnown RBP5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 OR6M1Q8NGM8 313 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 TMEM167AQ8TBQ9 72 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 CCDC124Q96CT7 223 aaKnown RBP5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 ADTRPQ96IZ2 230 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 OR10C1Q96KK4 312 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 GABARAPL3Q9BY60 117 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 MS4A6AQ9H2W1 248 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 GHRLQ9UBU3 117 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 AK3Q9UIJ7 227 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 MGAT4AQ9UM21 535 aa5.15□□□□□ -1.59
SPTLC1-205ENST00000477888 NACAE9PAV3 2078 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 IGHV3-49A0A0A0MS15 119 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 TRAV2A0A0B4J234 112 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 TRDCB7Z8K6 153 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 G3V2T6 193 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 SRMP19623 302 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 SERPINB10P48595 397 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 ARFRP1Q13795 201 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 OR2G6Q5TZ20 316 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 MEDAGQ5VYS4 303 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 Q6ZSN1 163 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 MISP3Q96FF7 219 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 CMTM3Q96MX0 182 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 ATP6V0BQ99437 205 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 UQCC2Q9BRT2 126 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 TM2D1Q9BX74 207 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 KRTAP1-5Q9BYS1 174 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 GABARAPL1Q9H0R8 117 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 PLEKHJ1Q9NW61 149 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 THYN1Q9P016 225 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 CKLFQ9UBR5 152 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 DKK2Q9UBU2 259 aa5.14□□□□□ -1.59
SPTLC1-205ENST00000477888 IGHV3OR16-13A0A075B7E8 117 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 TRBV6-7A0A0A0MS04 114 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 TRAV14DV4A0A0A6YYC5 116 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 A0A0A6YYD4 124 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 IGHV3-74A0A0B4J1X5 117 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 A0A1W2PPK0 400 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 TCRBV3S1A0A5B6 114 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 IGLC7A0M8Q6 106 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 KNCNA6PVL3 124 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 RAB27BO00194 218 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 LCE2BO14633 110 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 OGG1O15527 345 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms