RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 EGR1P18146 543 aa15.79■□□□□ 0.12
VARS2-209ENST00000477288 RND3P61587 244 aa15.79■□□□□ 0.12
VARS2-209ENST00000477288 CLDND2Q8NHS1 167 aa15.79■□□□□ 0.12
VARS2-209ENST00000477288 SFRP2Q96HF1 295 aa15.79■□□□□ 0.12
VARS2-209ENST00000477288 IGHV3OR16-8A0A075B7F1 116 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 FAM90A26D6RGX4 464 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 BSPH1Q075Z2 132 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 OR5P3Q8WZ94 311 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 MRPL16Q9NX20 251 aaKnown RBP15.78■□□□□ 0.12
VARS2-209ENST00000477288 RFPL3SP0C7P2 107 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 SMIM13P0DJ93 91 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 TIMM23BQ5SRD1 257 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 SPSB2Q99619 263 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 C7orf69Q9H7B7 122 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 RNASE4P34096 147 aaKnown RBP15.78■□□□□ 0.12
VARS2-209ENST00000477288 TMEM30BQ3MIR4 351 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 CENPWQ5EE01 88 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 WDR82Q6UXN9 313 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 FOXA2Q9Y261 457 aaPredicted RBP15.78■□□□□ 0.12
VARS2-209ENST00000477288 NINQ8N4C6 2090 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 SCN4AP35499 1836 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 DOCK3Q8IZD9 2030 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 PROB1E7EW31 1015 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 GCHFRP30047 84 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 CYP2G1PQ6ZSU1 146 aa15.78■□□□□ 0.12
VARS2-209ENST00000477288 PUSL1Q8N0Z8 303 aaKnown RBP15.78■□□□□ 0.12
VARS2-209ENST00000477288 FBXL15Q9H469 300 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 IGKV3D-20A0A0C4DH25 116 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 OR11H12B2RN74 326 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 OR11H1Q8NG94 326 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 OR11H2Q8NH07 326 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 ATAD5Q96QE3 1844 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 H7C1H1 209 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 FAM201AQ5SY85 155 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 DRAM1Q8N682 238 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 Q96M66 194 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 FBXL7Q9UJT9 491 aa15.77■□□□□ 0.12
VARS2-209ENST00000477288 FOXA3P55318 350 aaPredicted RBP15.77■□□□□ 0.11
VARS2-209ENST00000477288 NEU4Q8WWR8 484 aaPredicted RBP15.77■□□□□ 0.11
VARS2-209ENST00000477288 WFDC6Q9BQY6 131 aa15.77■□□□□ 0.11
VARS2-209ENST00000477288 ZNF660Q6AZW8 331 aaPredicted RBP15.77■□□□□ 0.11
VARS2-209ENST00000477288 CFAP161Q6P656 301 aa15.77■□□□□ 0.11
VARS2-209ENST00000477288 KCNS1Q96KK3 526 aa15.77■□□□□ 0.11
VARS2-209ENST00000477288 RP1P56715 2156 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 HBBP68871 147 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 TRGV2A0A075B6R0 118 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 SAPCD1Q5SSQ6 148 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 ZNF414Q96IQ9 312 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 G6PC2Q9NQR9 355 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 SEMA5BQ9P283 1151 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 C7orf66A4D0T2 115 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 C1QTNF9BB2RNN3 333 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 NPIPB4C9JG80 1138 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 NPIPB9F8W1W9 429 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 NPIPB7O75200 414 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 C1orf100Q5SVJ3 147 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 ZNF324BQ6AW86 544 aaPredicted RBP15.76■□□□□ 0.11
VARS2-209ENST00000477288 JKAMPQ9P055 326 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 A0A1W2PR77 199 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 ZNF98A6NK75 572 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 PPP1R27Q86WC6 154 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 C5orf66Q9H5L9 145 aa15.76■□□□□ 0.11
VARS2-209ENST00000477288 ZNF703Q9H7S9 590 aaPredicted RBP15.76■□□□□ 0.11
VARS2-209ENST00000477288 CEACAM1P13688 526 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 GLRXP35754 106 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 MEF2CQ06413 473 aaPredicted RBP15.75■□□□□ 0.11
VARS2-209ENST00000477288 CLEC19AQ6UXS0 136 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 TEX45Q8NA69 505 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 PPP1R3EQ9H7J1 279 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 TRBV7-9A0A0J9YWB2 115 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 CXorf65A6NEN9 183 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 SNAI2O43623 268 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 GPR183P32249 361 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 GDF15Q99988 308 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 CBLN4Q9NTU7 201 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 DPM3Q9P2X0 92 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 CDKN1AP38936 164 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 SMIM8Q96KF7 97 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 UNC13CQ8NB66 2214 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 KLF4O43474 513 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 IL6RP08887 468 aaPredicted RBP15.75■□□□□ 0.11
VARS2-209ENST00000477288 CECR9P0C854 216 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 SCGB3A1Q96QR1 104 aa15.75■□□□□ 0.11
VARS2-209ENST00000477288 ARID1AO14497 2285 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 C19orf24Q9BVV8 132 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 A0A0G2JLM5 398 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 FAM57AQ8TBR7 257 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 IGKV1D-42A0A075B6H8 117 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 TRBV5-7A0A0A0MS05 114 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 MALP21145 153 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 TMEM187Q14656 261 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 ACP7Q6ZNF0 438 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 REPIN1Q9BWE0 567 aaKnown RBP15.74■□□□□ 0.11
VARS2-209ENST00000477288 COL11A1P12107 1806 aaPredicted RBP15.74■□□□□ 0.11
VARS2-209ENST00000477288 PLSCR2Q9NRY7 297 aa15.74■□□□□ 0.11
VARS2-209ENST00000477288 IGHV3-11P01762 117 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 NMBP08949 121 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 CBLN1P23435 193 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 FHITP49789 147 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 ST6GALNAC3Q8NDV1 305 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms