RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 DEFA4P12838 97 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 HIST1H1DP16402 221 aaKnown RBP5.49□□□□□ -1.53
BRCA1-214ENST00000477152 DUTP33316 252 aaKnown RBP5.49□□□□□ -1.53
BRCA1-214ENST00000477152 PJVKQ0ZLH3 352 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 ZNF57Q68EA5 555 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-214ENST00000477152 IL34Q6ZMJ4 242 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 KCTD9Q7L273 389 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 GPHB5Q86YW7 130 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 TMEM217Q8N7C4 229 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 BORCS5Q969J3 196 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 CXorf58Q96LI9 332 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 DCSTAMPQ9H295 470 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 HIPK2Q9H2X6 1198 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 KCNK15Q9H427 330 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 PLEKHA3Q9HB20 300 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 LSM2Q9Y333 95 aaKnown RBP5.49□□□□□ -1.53
BRCA1-214ENST00000477152 A0A075B6Q4 140 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 TRBV7-1A0A0A6YYK4 115 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 TRBV9A0A0B4J1U6 114 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 TRAV25A0A0B4J276 109 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 IGKV1-6A0A0C4DH72 117 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 NPIPB5A8MRT5 1133 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 FCGR3BO75015 233 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 RAB3BP20337 219 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 GALP22466 123 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 ARL3P36405 182 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 RPL27AP46776 148 aaKnown RBP5.48□□□□□ -1.53
BRCA1-214ENST00000477152 DEFB114Q30KQ6 69 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 C15orf32Q32M92 178 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 IGSF11Q5DX21 431 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 HES5Q5TA89 166 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 ADAMTSL5Q6ZMM2 481 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 RBPMS2Q6ZRY4 209 aaKnown RBP5.48□□□□□ -1.53
BRCA1-214ENST00000477152 PRSS48Q7RTY5 328 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 H1FOOQ8IZA3 346 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-214ENST00000477152 OR52B4Q8NGK2 314 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 OR4A5Q8NH83 315 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 OR2A7Q96R45 310 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 MGLLQ99685 303 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 ATG5Q9H1Y0 275 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 ZNF230Q9UIE0 474 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-214ENST00000477152 OR2W1Q9Y3N9 320 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 STAB2Q8WWQ8 2551 aa5.48□□□□□ -1.53
BRCA1-214ENST00000477152 LOC102724200A0A096LPH7 203 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 C2orf70A6NJV1 201 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 BMPR1BO00238 502 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 OR2J3O76001 311 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 SAA1P0DJI8 122 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 APELAP0DMC3 54 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 FOLR2P14207 255 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 MYOD1P15172 320 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 GNB3P16520 340 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 HSPA13P48723 471 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 APOC4P55056 127 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 CLDN12P56749 244 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 RPS25P62851 125 aaKnown RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 IRF3Q14653 427 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 THOC7Q6I9Y2 204 aaKnown RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 LAMTOR1Q6IAA8 161 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 LAIR2Q6ISS4 152 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 CNIH2Q6PI25 160 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 ZNF66Q6ZN08 573 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 TMEM91Q6ZNR0 172 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 ZNF367Q7RTV3 350 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 DDB2Q92466 427 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 GGTLC1Q9BX51 225 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 C6orf62Q9GZU0 229 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 ZNF430Q9H8G1 570 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 ZC4H2Q9NQZ6 224 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 KLK5Q9Y337 293 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 UFC1Q9Y3C8 167 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 ZNF320A2RRD8 509 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 NUPR2A6NF83 97 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 IFITM5A6NNB3 132 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 SRRM4A7MD48 611 aaKnown RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 MFNGO00587 321 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 UBE2CO00762 179 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 PRYO14603 147 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 CBLN1P23435 193 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 CRHBPP24387 322 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 ELLP55199 621 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 CMC4P56277 68 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 LINC00205P59089 165 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 GNG2P59768 71 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 CATR1Q13166 79 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 LINC00322Q6ZN03 302 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 HSD17B13Q7Z5P4 300 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 TCTEX1D2Q8WW35 142 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 GLMPQ8WWB7 406 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 FYTTD1Q96QD9 318 aaKnown RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 SRSF8Q9BRL6 282 aaKnown RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 DUSP21Q9H596 190 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 SLC2A9Q9NRM0 540 aa5.47□□□□□ -1.53
BRCA1-214ENST00000477152 RBMX2Q9Y388 322 aaKnown RBP5.47□□□□□ -1.53
BRCA1-214ENST00000477152 TNCP24821 2201 aa5.46□□□□□ -1.53
BRCA1-214ENST00000477152 KBTBD11O94819 623 aa5.46□□□□□ -1.54
BRCA1-214ENST00000477152 TRBV12-3P01733 135 aa5.46□□□□□ -1.54
BRCA1-214ENST00000477152 HLA-DQB1P01920 261 aa5.46□□□□□ -1.54
BRCA1-214ENST00000477152 SSBP2P81877 361 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-214ENST00000477152 FABP5Q01469 135 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms