RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ZNF735P0CB33 412 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 NHLRC4P0CG21 123 aaPredicted RBP7.86□□□□□ -1.15
CCM2-208ENST00000476594 MRGPRG-AS1Q2M3A8 158 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 VAX1Q5SQQ9 334 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 C10orf55Q5SWW7 151 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 CLVS1Q8IUQ0 354 aaPredicted RBP7.86□□□□□ -1.15
CCM2-208ENST00000476594 ARRDC1Q8N5I2 433 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 OR9G4Q8NGQ1 327 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 FCAMRQ8WWV6 532 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 DGCR14Q96DF8 476 aaKnown RBP7.86□□□□□ -1.15
CCM2-208ENST00000476594 ZNF486Q96H40 463 aaPredicted RBP7.86□□□□□ -1.15
CCM2-208ENST00000476594 CXorf58Q96LI9 332 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 PRR25Q96S07 402 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 AKIP1Q9NQ31 210 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 TMEM140Q9NV12 185 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 FKBP11Q9NYL4 201 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 TNCP24821 2201 aa7.86□□□□□ -1.15
CCM2-208ENST00000476594 HMX3A6NHT5 357 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 UPK2O00526 184 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 OR2J3O76001 311 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 ATG12O94817 140 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 S1PR2O95136 353 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 CRYGCP07315 174 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 PSMB6P28072 239 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 ALDH3B2P48448 385 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 TMBIM6P55061 237 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 UCP3P55916 312 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 TAS2R19P59542 299 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 SSBP1Q04837 148 aaKnown RBP7.85□□□□□ -1.15
CCM2-208ENST00000476594 KLF5Q13887 457 aaPredicted RBP7.85□□□□□ -1.15
CCM2-208ENST00000476594 C15orf32Q32M92 178 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 LCN12Q6JVE5 192 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 CADM3Q8N126 398 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 OR1L6Q8NGR2 347 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 OR1L8Q8NGR8 309 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 EEF1AKMT3Q96AZ1 226 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 TMEM56Q96MV1 263 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 GPHA2Q96T91 129 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 QTRT1Q9BXR0 403 aaKnown RBP7.85□□□□□ -1.15
CCM2-208ENST00000476594 NAA50Q9GZZ1 169 aaKnown RBP7.85□□□□□ -1.15
CCM2-208ENST00000476594 FXYD6Q9H0Q3 95 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 FBXL7Q9UJT9 491 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 PRNDQ9UKY0 176 aa7.85□□□□□ -1.15
CCM2-208ENST00000476594 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.84□□□□□ -1.15
CCM2-208ENST00000476594 TRBV7-1A0A0A6YYK4 115 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 TEX22C9J3V5 150 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 GGCTO75223 188 aaKnown RBP7.84□□□□□ -1.15
CCM2-208ENST00000476594 SERPINE2P07093 398 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 IL6RP08887 468 aaPredicted RBP7.84□□□□□ -1.15
CCM2-208ENST00000476594 TRAPPC2P0DI81 140 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 TRAPPC2BP0DI82 140 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 GP9P14770 177 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 PGAM2P15259 253 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 RPA2P15927 270 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 CTRB1P17538 263 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 LPAR6P43657 344 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 RPL5P46777 297 aaKnown RBP7.84□□□□□ -1.15
CCM2-208ENST00000476594 SYNJ2BPP57105 145 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 BRWD1-AS2P59051 145 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 CTRB2Q6GPI1 263 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 LYSMD2Q8IV50 215 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 CCDC71LQ8N9Z2 235 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 OR2K2Q8NGT1 345 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 ZFAND1Q8TCF1 268 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 LSM10Q969L4 123 aaKnown RBP7.84□□□□□ -1.15
CCM2-208ENST00000476594 SIGLEC8Q9NYZ4 499 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 CCDC59Q9P031 241 aaKnown RBP7.84□□□□□ -1.15
CCM2-208ENST00000476594 MTFP1Q9UDX5 166 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 LSM4Q9Y4Z0 139 aaKnown RBP7.84□□□□□ -1.15
CCM2-208ENST00000476594 SORL1Q92673 2214 aa7.84□□□□□ -1.15
CCM2-208ENST00000476594 GABARAPH6UMI1 98 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 B3GALNT1O75752 331 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 KRASP01116 189 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 IGLV1-51P01701 117 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 PRH1P02810 166 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 SPNP16150 400 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 MECP2P51608 486 aaKnown RBP7.83□□□□□ -1.16
CCM2-208ENST00000476594 OR2B8PP59922 312 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 MEF2DQ14814 521 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 FAM106AQ4KMX7 169 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 PHLDA2Q53GA4 152 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 RNASE12Q5GAN4 147 aaKnown RBP7.83□□□□□ -1.16
CCM2-208ENST00000476594 H2BFWTQ7Z2G1 175 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 TBC1D26Q86UD7 250 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 GTSCR1Q86UQ5 136 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 SGPP2Q8IWX5 399 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 Q8N402 240 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 OR5B3Q8NH48 314 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 DYNLRB2Q8TF09 96 aa7.83□□□□□ -1.16
CCM2-208ENST00000476594 DISC1C4P0D8 188 aa7.82□□□□□ -1.16
CCM2-208ENST00000476594 M0QYG6 137 aa7.82□□□□□ -1.16
CCM2-208ENST00000476594 RBMXL2O75526 392 aaKnown RBP7.82□□□□□ -1.16
CCM2-208ENST00000476594 RAB3DO95716 219 aa7.82□□□□□ -1.16
CCM2-208ENST00000476594 AREGP15514 252 aa7.82□□□□□ -1.16
CCM2-208ENST00000476594 PTBP1P26599 531 aaKnown RBP eCLIP7.82□□□□□ -1.169e-9■■■■■ 35.7
CCM2-208ENST00000476594 ARL3P36405 182 aa7.82□□□□□ -1.16
CCM2-208ENST00000476594 RND3P61587 244 aa7.82□□□□□ -1.16
CCM2-208ENST00000476594 DEFA5Q01523 94 aa7.82□□□□□ -1.16
CCM2-208ENST00000476594 ZNF45Q02386 682 aa7.82□□□□□ -1.16
CCM2-208ENST00000476594 IL18Q14116 193 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms