RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 RAB27BO00194 218 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 TGOLN2O43493 480 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 IGLV2-14P01704 120 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 CTSDP07339 412 aaPredicted RBP12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 GNB3P16520 340 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 CRHBPP24387 322 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 PTBP1P26599 531 aaKnown RBP eCLIP12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 BRWD1-AS2P59051 145 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 RPL8P62917 257 aaKnown RBP12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 SSX9Q7RTT3 188 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 OR4S2Q8NH73 311 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 OR4A5Q8NH83 315 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 S100A14Q9HCY8 104 aa12.02□□□□□ -0.49
APOBEC3F-203ENST00000476513 TMEM272A0A1B0GTI8 110 aa12.01□□□□□ -0.49
APOBEC3F-203ENST00000476513 C11orf94C9JXX5 98 aa12.01□□□□□ -0.49
APOBEC3F-203ENST00000476513 MFNGO00587 321 aa12.01□□□□□ -0.49
APOBEC3F-203ENST00000476513 CD36P16671 472 aa12.01□□□□□ -0.49
APOBEC3F-203ENST00000476513 HLA-GP17693 338 aa12.01□□□□□ -0.49
APOBEC3F-203ENST00000476513 ADMP35318 185 aa12.01□□□□□ -0.49
APOBEC3F-203ENST00000476513 IRF3Q14653 427 aa12.01□□□□□ -0.49
APOBEC3F-203ENST00000476513 Q6ZS49 121 aa12.01□□□□□ -0.49
APOBEC3F-203ENST00000476513 A0A075B6Q4 140 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 OR2T8A6NH00 312 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 RTL8CO15255 209 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 HLA-DQB1P01920 261 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 C10orf67Q8IYJ2 551 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 TCTEX1D2Q8WW35 142 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 TMEM203Q969S6 136 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 CENPOQ9BU64 300 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 PLCXD1Q9NUJ7 323 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 RAB22AQ9UL26 194 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 OR2W1Q9Y3N9 320 aa12□□□□□ -0.49
APOBEC3F-203ENST00000476513 IGHV3OR16-8A0A075B7F1 116 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 IGKV1D-13A0A0B4J2D9 117 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 IGLC7A0M8Q6 106 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 ZNF207O43670 478 aaKnown RBP11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 IGKV1-13P0DP09 117 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 HIST1H1DP16402 221 aaKnown RBP11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 OR2B8PP59922 312 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 EIF4EBP1Q13541 118 aaPredicted RBP11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 TMEM91Q6ZNR0 172 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 BPIFB6Q8NFQ5 453 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 OR10R2Q8NGX6 335 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 VN1R17PQ8TDU5 208 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 HSD17B10Q99714 261 aaKnown RBP11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 C20orf24Q9BUV8 137 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 MND1Q9BWT6 205 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 HRH4Q9H3N8 390 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 FKBP14Q9NWM8 211 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 SPATA2Q9UM82 520 aa11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 LSM2Q9Y333 95 aaKnown RBP11.99□□□□□ -0.49
APOBEC3F-203ENST00000476513 K7EMT4 169 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 NDUFA4O00483 81 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 SLC22A5O76082 557 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 CA1P00915 261 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 NFYAP23511 347 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 GADD45AP24522 165 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 TALDO1P37837 337 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 TFPI2P48307 235 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 SPHARQ15513 63 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 SSX1Q16384 188 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 DHRSXQ8N5I4 330 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 BSCL2Q96G97 398 aaPredicted RBP11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 RNF2Q99496 336 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 CHRDL1Q9BU40 450 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 THYN1Q9P016 225 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 ETV7Q9Y603 341 aa11.98□□□□□ -0.49
APOBEC3F-203ENST00000476513 IGHV4-4A0A075B6R2 117 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 HRASP01112 189 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 GNAO1P09471 354 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 CMC4P56277 68 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 TMEM187Q14656 261 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 TIMM50Q3ZCQ8 353 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 HES5Q5TA89 166 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 LIPKQ5VXJ0 399 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 MFSD4AQ8N468 514 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 Q8NAQ8 132 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 GPHA2Q96T91 129 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 BET1LQ9NYM9 111 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 SMPXQ9UHP9 88 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 ELF5Q9UKW6 265 aaPredicted RBP11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 V9GY05 133 aa11.97□□□□□ -0.49
APOBEC3F-203ENST00000476513 ANKRD65E5RJM6 399 aa11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 ARL6IP5O75915 188 aa11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 HLA-DMBP28068 263 aa11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 SPSB3Q6PJ21 355 aa11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 NR2C2APQ86WQ0 139 aa11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 C8orf59Q8N0T1 100 aaPredicted RBP11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 SRSF8Q9BRL6 282 aaKnown RBP11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 HRASLSQ9HDD0 168 aa11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 TAS2R8Q9NYW2 309 aa11.96□□□□□ -0.49
APOBEC3F-203ENST00000476513 TRAV3A0A0B4J244 114 aa11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 MRPS14O60783 128 aaKnown RBP11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 RBMY1A1P0DJD3 496 aaKnown RBP11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 RBMY1CP0DJD4 496 aa11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 RANBP1P43487 201 aa11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 RPS25P62851 125 aaKnown RBP11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 Q6ZTC4 211 aa11.95□□□□□ -0.5
APOBEC3F-203ENST00000476513 OR10W1Q8NGF6 305 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms