RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 QTRT1Q9BXR0 403 aaKnown RBP13.2□□□□□ -0.3
VARS2-207ENST00000476162 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
VARS2-207ENST00000476162 ITGB1BP1O14713 200 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 C1orf229Q6ZS94 237 aaPredicted RBP13.19□□□□□ -0.3
VARS2-207ENST00000476162 VKORC1L1Q8N0U8 176 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 MBD3L1Q8WWY6 194 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 TMEM18Q96B42 140 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 CIB3Q96Q77 187 aaPredicted RBP13.19□□□□□ -0.3
VARS2-207ENST00000476162 CCL13Q99616 98 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 ZNF665Q9H7R5 613 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 KBTBD11-OT1A0A1B0GTJ5 212 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 DPRXA6NFQ7 191 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 TCF21O43680 179 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 GYPAP02724 150 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 OPN1MWP04001 364 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 OPN1MW2P0DN77 364 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 OPN1MW3P0DN78 364 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 TMEM41BQ5BJD5 291 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 Q8TCH9 128 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 FAM216AQ8WUB2 273 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 GAFA1Q96PS6 74 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 TMEM147Q9BVK8 224 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 NCOR1P1Q9H4R4 102 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 ELOVL5Q9NYP7 299 aa13.19□□□□□ -0.3
VARS2-207ENST00000476162 SMG1Q96Q15 3661 aaKnown RBP13.18□□□□□ -0.3
VARS2-207ENST00000476162 LOC102723971A0A1B0GUV8 181 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 ZFP92A6NM28 416 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 SIAH2O43255 324 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 PLA2G5P39877 138 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 CCL8P80075 99 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 CT45A1Q5HYN5 189 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 ZNF705AQ6ZN79 300 aaPredicted RBP13.18□□□□□ -0.3
VARS2-207ENST00000476162 CT45A3Q8NHU0 189 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 RNASE8Q8TDE3 154 aaKnown RBP13.18□□□□□ -0.3
VARS2-207ENST00000476162 PINX1Q96BK5 328 aaKnown RBP13.18□□□□□ -0.3
VARS2-207ENST00000476162 ACY3Q96HD9 319 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 GAL3ST2Q9H3Q3 398 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 PCNX1Q96RV3 2341 aa13.18□□□□□ -0.3
VARS2-207ENST00000476162 TRGV10A0A0A0MS01 117 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 IGKV1D-33P01593 117 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 IGKV1-33P01594 117 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 IL6RP08887 468 aaPredicted RBP13.17□□□□□ -0.3
VARS2-207ENST00000476162 PNRC1Q12796 327 aaPredicted RBP13.17□□□□□ -0.3
VARS2-207ENST00000476162 PMS2P11Q13670 270 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 TBR1Q16650 682 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 PRAMEF5Q5TYX0 476 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 CENPVQ7Z7K6 275 aaPredicted RBP13.17□□□□□ -0.3
VARS2-207ENST00000476162 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 OR10G4Q8NGN3 311 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 C22orf15Q8WYQ4 148 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 S1PR3Q99500 378 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 THBDP07204 575 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 PRR30Q53SZ7 412 aaPredicted RBP13.17□□□□□ -0.3
VARS2-207ENST00000476162 TCF23Q7RTU1 214 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 MRPL41Q8IXM3 137 aaKnown RBP13.17□□□□□ -0.3
VARS2-207ENST00000476162 ZCCHC24Q8N2G6 241 aaKnown RBP13.17□□□□□ -0.3
VARS2-207ENST00000476162 RPP25LQ8N5L8 163 aaKnown RBP13.17□□□□□ -0.3
VARS2-207ENST00000476162 SCNM1Q9BWG6 230 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
VARS2-207ENST00000476162 ROS1P08922 2347 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 PPP5D1E7EU14 171 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 RBFOX2O43251 390 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■■■□ 23.3
VARS2-207ENST00000476162 RAB7AP51149 207 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 BSPH1Q075Z2 132 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 ADIPOQQ15848 244 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 ACSM6Q6P461 480 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 ZNF788Q6ZQV5 615 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 SNRNP40Q96DI7 357 aaKnown RBP13.16□□□□□ -0.3
VARS2-207ENST00000476162 PYGO2Q9BRQ0 406 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 FKBP11Q9NYL4 201 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 MAP1LC3B2A6NCE7 125 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 C15orf62A8K5M9 175 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 BCL2P10415 239 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 GNB2P62879 340 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 TFF3Q07654 80 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 FAM90A2PQ658T7 463 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 OR4A16Q8NH70 328 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 DDB2Q92466 427 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 MAP1LC3BQ9GZQ8 125 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 RAB9BQ9NP90 201 aa13.16□□□□□ -0.3
VARS2-207ENST00000476162 CEP295Q9C0D2 2601 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 SAA2-SAA4A0A096LPE2 208 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 TRAV3A0A0B4J244 114 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 SCGB1D1O95968 90 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 SAA2P0DJI9 122 aaPredicted RBP13.15□□□□□ -0.3
VARS2-207ENST00000476162 CDKN1BP46527 198 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 HCFC1P51610 2035 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 ERVK-16P61578 105 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 OR5I1Q13606 314 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 ADGRG4Q8IZF6 3080 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 CISD1Q9NZ45 108 aaKnown RBP13.15□□□□□ -0.3
VARS2-207ENST00000476162 JKAMPQ9P055 326 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 GAB2Q9UQC2 676 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 ZNF835Q9Y2P0 537 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 DYSFO75923 2080 aa13.15□□□□□ -0.3
VARS2-207ENST00000476162 A0A1W2PPQ1 181 aa13.15□□□□□ -0.31
VARS2-207ENST00000476162 FAM90A9PA6NNJ1 464 aa13.15□□□□□ -0.31
VARS2-207ENST00000476162 VWC2Q2TAL6 325 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms