RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 IL7P13232 177 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 HLA-GP17693 338 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 UCP1P25874 307 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 RPL27AP46776 148 aaKnown RBP11.82□□□□□ -0.52
SNX13-207ENST00000475800 THOC7Q6I9Y2 204 aaKnown RBP11.82□□□□□ -0.52
SNX13-207ENST00000475800 SLC25A42Q86VD7 318 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 SGPP2Q8IWX5 399 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 WDR12Q9GZL7 423 aaKnown RBP11.82□□□□□ -0.52
SNX13-207ENST00000475800 COMMD5Q9GZQ3 224 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 SLA2Q9H6Q3 261 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 NAA60Q9H7X0 242 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 KCNIP3Q9Y2W7 256 aa11.82□□□□□ -0.52
SNX13-207ENST00000475800 PIGBOS1A0A0B4J2F0 54 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 A0A1W2PRX2 142 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 CRYM-AS1A6NIL9 109 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 NUDT19A8MXV4 375 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 BRI3O95415 125 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 RPLP1P05386 114 aaKnown RBP11.81□□□□□ -0.52
SNX13-207ENST00000475800 G6PCP35575 357 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 CDX1P47902 265 aaPredicted RBP11.81□□□□□ -0.52
SNX13-207ENST00000475800 RAB9AP51151 201 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 DHODHQ02127 395 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 RBMS2Q15434 407 aaKnown RBP11.81□□□□□ -0.52
SNX13-207ENST00000475800 TRIM16LQ309B1 348 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 H2BFWTQ7Z2G1 175 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 MYOZ3Q8TDC0 251 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 SEC22AQ96IW7 307 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 TP53RKQ96S44 253 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 SRSF8Q9BRL6 282 aaKnown RBP11.81□□□□□ -0.52
SNX13-207ENST00000475800 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 FKBP11Q9NYL4 201 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 PRNDQ9UKY0 176 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 VSIG4Q9Y279 399 aa11.81□□□□□ -0.52
SNX13-207ENST00000475800 ZNF695Q8IW36 515 aa11.8□□□□□ -0.52
SNX13-207ENST00000475800 GALNT14Q96FL9 552 aa11.8□□□□□ -0.52
SNX13-207ENST00000475800 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
SNX13-207ENST00000475800 NOTCH3Q9UM47 2321 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 SOX15O60248 233 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 IGKV1-39P01597 117 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 IGKV1D-39P04432 117 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 OR9G9P0C7N8 305 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 ANXA3P12429 323 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 AKR1C2P52895 323 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 ZNF846Q147U1 533 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 C10orf55Q5SWW7 151 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 ASPHD1Q5U4P2 390 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 HSD17B13Q7Z5P4 300 aaPredicted RBP11.79□□□□□ -0.52
SNX13-207ENST00000475800 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 OR1L8Q8NGR8 309 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 C4orf3Q8WVX3 66 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 FYTTD1Q96QD9 318 aaKnown RBP11.79□□□□□ -0.52
SNX13-207ENST00000475800 ZNF355PQ9NSJ1 428 aa11.79□□□□□ -0.52
SNX13-207ENST00000475800 TRAV3A0A0B4J244 114 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 CDS2O95674 445 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 DHFRP00374 187 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 PF4P02776 101 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 AKR1C4P17516 323 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 TPPP2P59282 170 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 OR2B8PP59922 312 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 SRPXP78539 464 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 SP6Q3SY56 376 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 TMEM128Q5BJH2 165 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 LCNL1Q6ZST4 164 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 FAM219AQ8IW50 185 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 TTC9CQ8N5M4 171 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 ZNF491Q8N8L2 437 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 ADAD2Q8NCV1 583 aaKnown RBP11.78□□□□□ -0.52
SNX13-207ENST00000475800 OR5T1Q8NG75 326 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 OR5B3Q8NH48 314 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 GLYATL2Q8WU03 294 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 RBPMSQ93062 196 aaKnown RBP11.78□□□□□ -0.52
SNX13-207ENST00000475800 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 RRNAD1Q96FB5 475 aaKnown RBP11.78□□□□□ -0.52
SNX13-207ENST00000475800 QTRT1Q9BXR0 403 aaKnown RBP11.78□□□□□ -0.52
SNX13-207ENST00000475800 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 ZNF257Q9Y2Q1 563 aa11.78□□□□□ -0.52
SNX13-207ENST00000475800 A0A0G2JLM5 398 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 C15orf61A6NNL5 157 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 NPIPB5A8MRT5 1133 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 TEX22C9J3V5 150 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 NDUFB6O95139 128 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.53
SNX13-207ENST00000475800 TRGV3P03979 118 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 UBE2MP61081 183 aaKnown RBP11.77□□□□□ -0.53
SNX13-207ENST00000475800 RUNX1Q01196 453 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 TMED4Q7Z7H5 227 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
SNX13-207ENST00000475800 CENPSQ8N2Z9 138 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.53
SNX13-207ENST00000475800 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 TMEM14BQ9NUH8 114 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 OR51B2Q9Y5P1 312 aa11.77□□□□□ -0.53
SNX13-207ENST00000475800 LINC00854A0A1B0GVQ3 168 aa11.76□□□□□ -0.53
SNX13-207ENST00000475800 LYRM1O43325 122 aa11.76□□□□□ -0.53
SNX13-207ENST00000475800 RBMXL2O75526 392 aaKnown RBP11.76□□□□□ -0.53
SNX13-207ENST00000475800 TRAPPC2P0DI81 140 aa11.76□□□□□ -0.53
SNX13-207ENST00000475800 TRAPPC2BP0DI82 140 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms