RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 AUNIPQ9H7T9 357 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 TUBA4BQ9H853 241 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 PALMDQ9NP74 551 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 PEMTQ9UBM1 199 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 MLXQ9UH92 298 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 MRPS7Q9Y2R9 242 aaKnown RBP5.27□□□□□ -1.57
HDAC3-207ENST00000475549 CEPT1Q9Y6K0 416 aa5.27□□□□□ -1.57
HDAC3-207ENST00000475549 BIRC6Q9NR09 4857 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 TNCP24821 2201 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 IGLC7A0M8Q6 106 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 MEIS3P1A6NDR6 274 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 OR11H12B2RN74 326 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 SULT1C2O00338 296 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 CREBL2O60519 120 aaPredicted RBP5.26□□□□□ -1.57
HDAC3-207ENST00000475549 PPYP01298 95 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 CLEC3BP05452 202 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 HLA-GP17693 338 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 GNRHRP30968 328 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 MAS1LP35410 378 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 ARL3P36405 182 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 RPL27AP46776 148 aaKnown RBP5.26□□□□□ -1.57
HDAC3-207ENST00000475549 RPL8P62917 257 aaKnown RBP5.26□□□□□ -1.57
HDAC3-207ENST00000475549 TIMM50Q3ZCQ8 353 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 TM4SF20Q53R12 229 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF818PQ6ZRF7 136 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 LAX1Q8IWV1 398 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 TMEM61Q8N0U2 210 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 SPAG16Q8N0X2 631 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 OR10W1Q8NGF6 305 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 VSTM2AQ8TAG5 236 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 SECTM1Q8WVN6 248 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 GIMAP1Q8WWP7 306 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 FCGR1BQ92637 280 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF414Q96IQ9 312 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 YTHDF1Q9BYJ9 559 aaKnown RBP5.26□□□□□ -1.57
HDAC3-207ENST00000475549 BET1LQ9NYM9 111 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 TECRQ9NZ01 308 aaKnown RBP5.26□□□□□ -1.57
HDAC3-207ENST00000475549 SSR3Q9UNL2 185 aa5.26□□□□□ -1.57
HDAC3-207ENST00000475549 LOC100506127A0A0U1RQW1 187 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF320A2RRD8 509 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 A8MWP6 167 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 UPK2O00526 184 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 LCE2BO14633 110 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 RBFOX2O43251 390 aaKnown RBP eCLIP5.25□□□□□ -1.57
HDAC3-207ENST00000475549 SCGNO76038 276 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 HRASP01112 189 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 C8orf88P0DMB2 117 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 RPA2P15927 270 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 VAMP1P23763 118 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 RFX2P48378 723 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 MFAP2P55001 183 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 SCAND1P57086 179 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 WT1-ASQ06250 92 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 MSMO1Q15800 293 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 POU2AF1Q16633 256 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 GUCA2BQ16661 112 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 DHRS11Q6UWP2 260 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 SLC25A42Q86VD7 318 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 LYSMD2Q8IV50 215 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 UXS1Q8NBZ7 420 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 OR5AP2Q8NGF4 316 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 OR4A5Q8NH83 315 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF502Q8TBZ5 544 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 SLC5A7Q9GZV3 580 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 SRD5A3Q9H8P0 318 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 SLC2A8Q9NY64 477 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 ETV7Q9Y603 341 aa5.25□□□□□ -1.57
HDAC3-207ENST00000475549 A0A0A6YYH2 397 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 IGHV3-35A0A0C4DH35 117 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 TEX50A0A1B0GTY4 177 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 DPPA5A6NC42 116 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 A6NJ64 397 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 F8W735 103 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-207ENST00000475549 XRCC3O43542 346 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 PGLYRP1O75594 196 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-207ENST00000475549 TPPPO94811 219 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 SCAF4O95104 1147 aaKnown RBP5.24□□□□□ -1.57
HDAC3-207ENST00000475549 S1PR2O95136 353 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 HPRT1P00492 218 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 IFNA6P05013 189 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 DEFA4P12838 97 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 HIST1H1BP16401 226 aaKnown RBP5.24□□□□□ -1.57
HDAC3-207ENST00000475549 PTBP1P26599 531 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC3-207ENST00000475549 RPS19P39019 145 aaKnown RBP5.24□□□□□ -1.57
HDAC3-207ENST00000475549 TAS2R31P59538 309 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 FXYD4P59646 89 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 ARPC4P59998 168 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 NEDD8Q15843 81 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF585BQ52M93 769 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 FAM209BQ5JX69 171 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF57Q68EA5 555 aaPredicted RBP5.24□□□□□ -1.57
HDAC3-207ENST00000475549 ZBTB34Q8NCN2 500 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 OR51H1Q8NH63 302 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 DYNLRB2Q8TF09 96 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 FCAMRQ8WWV6 532 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 EEF1AKMT3Q96AZ1 226 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 OVOL2Q9BRP0 275 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 PLEKHA2Q9HB19 425 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 HRASLSQ9HDD0 168 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 TMEM140Q9NV12 185 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms