RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PRSS22Q9GZN4 317 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 WASHC3Q9Y3C0 194 aa12.43□□□□□ -0.42
CPSF3-203ENST00000475482 FXYD6-FXYD2A0A087WZ82 144 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 MARCH11A6NNE9 402 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 H7C2Y5 167 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 CRYZL1O95825 349 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 IGKV1-39P01597 117 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 IGKV1D-39P04432 117 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 PVALBP20472 110 aaPredicted RBP12.42□□□□□ -0.42
CPSF3-203ENST00000475482 BRWD1-AS2P59051 145 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 S100A10P60903 97 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 IL15RAQ13261 267 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 LRRC37A5PQ49AS3 106 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 TPTE2P1Q5T6R2 138 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 TMEM65Q6PI78 240 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 OR8H3Q8N146 312 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 OR4D5Q8NGN0 318 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 GPR146Q96CH1 333 aa12.42□□□□□ -0.42
CPSF3-203ENST00000475482 FLYWCH2Q96CP2 140 aaKnown RBP12.42□□□□□ -0.42
CPSF3-203ENST00000475482 WDR89Q96FK6 387 aaPredicted RBP12.42□□□□□ -0.42
CPSF3-203ENST00000475482 FAM90A26D6RGX4 464 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 H0YJW9 148 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 WRBO00258 174 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 SCGB1D2O95969 90 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 IGKV1-5P01602 117 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 BRS3P32247 399 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 G6PCP35575 357 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 NKX2-1P43699 371 aaPredicted RBP12.41□□□□□ -0.42
CPSF3-203ENST00000475482 REG1BP48304 166 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 DEFA6Q01524 100 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 RAB32Q13637 225 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 FBLN7Q53RD9 439 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 PRSS54Q6PEW0 395 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 ZNF546Q86UE3 836 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 INO80EQ8NBZ0 244 aaPredicted RBP12.41□□□□□ -0.42
CPSF3-203ENST00000475482 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.41□□□□□ -0.42
CPSF3-203ENST00000475482 CACNG5Q9UF02 275 aa12.41□□□□□ -0.42
CPSF3-203ENST00000475482 IGHV1-3A0A0C4DH29 117 aa12.4□□□□□ -0.42
CPSF3-203ENST00000475482 SHOXO15266 292 aa12.4□□□□□ -0.42
CPSF3-203ENST00000475482 MED6O75586 246 aa12.4□□□□□ -0.42
CPSF3-203ENST00000475482 AMY1AP04745 511 aa12.4□□□□□ -0.42
CPSF3-203ENST00000475482 LINC00205P59089 165 aa12.4□□□□□ -0.42
CPSF3-203ENST00000475482 POU2AF1Q16633 256 aa12.4□□□□□ -0.42
CPSF3-203ENST00000475482 TMEM177Q53S58 311 aa12.4□□□□□ -0.42
CPSF3-203ENST00000475482 VSTM2AQ8TAG5 236 aa12.4□□□□□ -0.42
CPSF3-203ENST00000475482 RBM14Q96PK6 669 aaKnown RBP12.4□□□□□ -0.42
CPSF3-203ENST00000475482 PRKDCP78527 4128 aaKnown RBP12.39□□□□□ -0.43
CPSF3-203ENST00000475482 TRAV14DV4A0A0A6YYC5 116 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 E5RGE8 158 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 G3V3Q6 166 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 PITX3O75364 302 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 RBMXL2O75526 392 aaKnown RBP12.39□□□□□ -0.43
CPSF3-203ENST00000475482 DEDDO75618 318 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 OR2F2O95006 317 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 LY86O95711 162 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
CPSF3-203ENST00000475482 LYL1P12980 280 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 CD24P25063 80 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 LGALS7P47929 136 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 NKX2-5P52952 324 aaPredicted RBP12.39□□□□□ -0.43
CPSF3-203ENST00000475482 Q5BKY6 102 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 HIST2H2BDQ6DRA6 164 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 MOB3BQ86TA1 216 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 THNSL2Q86YJ6 484 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 OR11H4Q8NGC9 324 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 OR4A16Q8NH70 328 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 DCUN1D4Q92564 292 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 RHOVQ96L33 236 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 RNF5Q99942 180 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 NSG2Q9Y328 171 aa12.39□□□□□ -0.43
CPSF3-203ENST00000475482 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
CPSF3-203ENST00000475482 TGP01266 2768 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 A0A0D9SG52 128 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 ADARB2-AS1A8MUL3 147 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 K7EPK0 472 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 L7N2F9 121 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 ARPC5O15511 151 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 FBXO24O75426 580 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 OPN1MWP04001 364 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 P0C879 139 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 OPN1MW2P0DN77 364 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 OPN1MW3P0DN78 364 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 CD1BP29016 333 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 RPS16P62249 146 aaKnown RBP12.38□□□□□ -0.43
CPSF3-203ENST00000475482 VAMP2P63027 116 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 ID3Q02535 119 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 PDLIM3Q53GG5 364 aaPredicted RBP12.38□□□□□ -0.43
CPSF3-203ENST00000475482 FOXRED2Q8IWF2 684 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 FAM71E2Q8N5Q1 922 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 OR4A5Q8NH83 315 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 FAM110DQ8TAY7 271 aaPredicted RBP12.38□□□□□ -0.43
CPSF3-203ENST00000475482 HARBI1Q96MB7 349 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 MFFQ9GZY8 342 aa12.38□□□□□ -0.43
CPSF3-203ENST00000475482 A0A0G2JRQ6 117 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 A0A1W2PPI3 338 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 CD28P10747 220 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 OR2F1Q13607 317 aa12.37□□□□□ -0.43
CPSF3-203ENST00000475482 DIAPH2-AS1Q14236 149 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms