RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-215	ENST00000475319	CXorf1	O96002	111 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TIMP1	P01033	207 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	HPN	P05981	417 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	B4GALT1	P15291	398 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	KIR2DS2	P43631	304 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	XG	P55808	180 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CLDN6	P56747	220 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR1D5	P58170	312 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	POU3F1	Q03052	451 aa	Predicted RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZNF117	Q03924	483 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	C3AR1	Q16581	482 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZNF74	Q16587	644 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	TBC1D28	Q2M2D7	210 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	POM121L1P	Q3SYA9	428 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CBLN3	Q6UW01	205 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	BPIFA4P	Q86YQ2	179 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	PRR22	Q8IZ63	422 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR8B3	Q8NGG8	313 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OSR1	Q8TAX0	266 aa	Predicted RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CT55	Q8WUE5	264 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	APOBEC4	Q8WW27	367 aa	Known RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	DDB2	Q92466	427 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	LSM10	Q969L4	123 aa	Known RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	ST6GALNAC6	Q969X2	333 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR8B2	Q96RD0	313 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	GFI1	Q99684	422 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	FAM103A1	Q9BTL3	118 aa	Known RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	OR2H1	Q9GZK4	316 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	SCRT2	Q9NQ03	307 aa		4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.97	□□□□□ -1.61
ECHDC1-215	ENST00000475319	CHD3	Q12873	2000 aa	Known RBP	4.96	□□□□□ -1.61
ECHDC1-215	ENST00000475319	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.96	□□□□□ -1.61
ECHDC1-215	ENST00000475319		A0A0A0MQY5	61 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	LRRC30	A6NM36	301 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SYS1-DBNDD2	H3BUS1	97 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319		J3QLW9	94 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PITX3	O75364	302 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CPSF4	O95639	269 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	EML2	O95834	649 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RBMX	P38159	391 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	FUT6	P51993	359 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	LIM2	P55344	173 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CLDN2	P57739	230 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	UBE2G1	P62253	170 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RPS11	P62280	158 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ATP5G2	Q06055	141 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ANXA2R	Q3ZCQ2	193 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GGTA1P	Q4G0N0	100 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OTP	Q5XKR4	325 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TMEM64	Q6YI46	380 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	STAC2	Q6ZMT1	411 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SPATA12	Q7Z6I5	190 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TMEM123	Q8N131	208 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CLDN19	Q8N6F1	224 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TPRX1	Q8N7U7	411 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR10J6P	Q8NGY7	276 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RPS4Y2	Q8TD47	263 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RPE	Q96AT9	228 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZG16B	Q96DA0	208 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HSD17B10	Q99714	261 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SCNM1	Q9BWG6	230 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TMEM191A	Q9H0A3	160 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ELOVL3	Q9HB03	270 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	BPIFA1	Q9NP55	256 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	INSIG2	Q9Y5U4	225 aa		4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.96	□□□□□ -1.62
ECHDC1-215	ENST00000475319	NSG1	A0A0A6YYJ2	146 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A0U1RRA0	63 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A1B0GV50	99 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A1W2PR77	199 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A1W2PRD5	423 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A1W2PRF3	423 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A1W2PRM7	423 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		A0A1W2PS18	150 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GRIFIN	A4D1Z8	144 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	PATE3	B3GLJ2	98 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		H3BMG7	143 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319		K7EN84	100 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	NPFF	O15130	113 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	CRX	O43186	299 aa	Predicted RBP	4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	APOM	O95445	188 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GABRG2	P18507	467 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	GATA2	P23769	480 aa	Predicted RBP	4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	BLVRB	P30043	206 aa	Predicted RBP	4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	SFTPD	P35247	375 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	MYBPH	Q13203	477 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	DIAPH2-AS1	Q14236	149 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RASL11A	Q6T310	242 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	HOGA1	Q86XE5	327 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	KIR3DL3	Q8N743	410 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	TMEM99	Q8N816	258 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR4X2	Q8NGF9	303 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RNF128	Q8TEB7	428 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	RNF138	Q8WVD3	245 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	OR5P2	Q8WZ92	322 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	AMELY	Q99218	206 aa		4.95	□□□□□ -1.62
ECHDC1-215	ENST00000475319	NAA38	Q9BRA0	125 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 54 ms