RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 DUSP21Q9H596 190 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
HLA-DOB-208ENST00000475235 TRGV10A0A0A0MS01 117 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 ALDOBP05062 364 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 CSN2P05814 226 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR13C7P0DN81 318 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 TAS2R43P59537 309 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 ZNF626Q68DY1 528 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR4A47Q6IF82 309 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 CRIP3Q6Q6R5 217 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 TCF23Q7RTU1 214 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 TRAPPC6BQ86SZ2 158 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 NIT1Q86X76 327 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 TPRX1Q8N7U7 411 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 LINC01006Q8NI28 216 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 CASTOR1Q8WTX7 329 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 TNFAIP8L1Q8WVP5 186 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 GGHQ92820 318 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 C16orf95Q9H693 158 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 TAS2R4Q9NYW5 299 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 JPT1Q9UK76 154 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
HLA-DOB-208ENST00000475235 A0A0G2JK05 382 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 FAM90A8PA6NJQ4 464 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 ODF3BA8MYP8 253 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 GABRPO00591 440 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 RAB29O14966 203 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 DEGS1O15121 323 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 PLA2G10O15496 165 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 AMBPP02760 352 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 ST3GAL4Q11206 333 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 IQCJQ1A5X6 159 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 ACSM3Q53FZ2 586 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 LIPKQ5VXJ0 399 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 DMKNQ6E0U4 476 aaPredicted RBP9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 CDPF1Q6NVV7 123 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 Q6ZSV7 163 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 RNF144BQ7Z419 303 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR52L2PQ8NGH6 319 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 AJUBAQ96IF1 538 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 C20orf144Q9BQM9 153 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 LYRM2Q9NU23 88 aaPredicted RBP9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 CKLFQ9UBR5 152 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 PPP5D1E7EU14 171 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 CLDN12P56749 244 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 TPBGQ13641 420 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 IL13RA2Q14627 380 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 Q499Y3 187 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 MINOS1Q5TGZ0 78 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 Q6P435 159 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR51A2Q8NGJ7 313 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 PCNPQ8WW12 178 aaKnown RBP9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 CDCA4Q9BXL8 241 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 TMEM133Q9H2Q1 129 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 PSORS1C1Q9UIG5 152 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 SIRT4Q9Y6E7 314 aaPredicted RBP9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 MINOS1-NBL1R4GNA1 71 aa9.31□□□□□ -0.92
HLA-DOB-208ENST00000475235 IGHV2-26A0A0B4J1V2 119 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 TRBV5-5A0A0J9YX44 114 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 ODAMA1E959 279 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 RGS11O94810 467 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 SMIM17P0DL12 118 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 GZMBP10144 247 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 NFYAP23511 347 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 ZNF93P35789 620 aaPredicted RBP9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 PIGPP57054 158 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 PROK1P58294 105 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 RPL32P62910 135 aaKnown RBP9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 CLINT1Q14677 625 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 ZNF79Q15937 498 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 FBLN7Q53RD9 439 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 TMEM177Q53S58 311 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 ASPHD2Q6ICH7 369 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 HEPN1Q6WQI6 88 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 IL34Q6ZMJ4 242 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 ZNF485Q8NCK3 441 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR51T1Q8NGJ9 327 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 MARCH1Q8TCQ1 289 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 GALNT14Q96FL9 552 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 CLEC7AQ9BXN2 247 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 RAB9BQ9NP90 201 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 IL36GQ9NZH8 169 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR6C3Q9NZP0 311 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 MRPL27Q9P0M9 148 aaKnown RBP9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 RAB22AQ9UL26 194 aa9.3□□□□□ -0.92
HLA-DOB-208ENST00000475235 ANKRD20A5PA0PJZ0 165 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 G3V4G9 280 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 H0Y980 276 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 TIMM23O14925 209 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 LYRM1O43325 122 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 TMEM50AO95807 157 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 CD1AP06126 327 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 GABRA5P31644 462 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 GLIPR1P48060 266 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 RAP2BP61225 183 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 RHEBQ15382 184 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 LY6EQ16553 131 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms