RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 FCN1O00602 326 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 ARPC1BO15143 372 aaKnown RBP9.27□□□□□ -0.93
CLIP2-204ENST00000474962 RBMXL2O75526 392 aaKnown RBP9.27□□□□□ -0.93
CLIP2-204ENST00000474962 KBTBD11O94819 623 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 CA2P00918 260 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 TCRBP04435 133 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 VDAC1P21796 283 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 G6PCP35575 357 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 AKR1C2P52895 323 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 CX3CL1P78423 397 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 SRPXP78539 464 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 FXYD3Q14802 87 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 ZNF585BQ52M93 769 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 OR4A47Q6IF82 309 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 OR4A5Q8NH83 315 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 RRNAD1Q96FB5 475 aaKnown RBP9.27□□□□□ -0.93
CLIP2-204ENST00000474962 TP53RKQ96S44 253 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 PHB2Q99623 299 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM222Q9H0R3 208 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 ZFP57Q9NU63 452 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM140Q9NV12 185 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 DNAH9Q9NYC9 4486 aa9.27□□□□□ -0.93
CLIP2-204ENST00000474962 IGHV7-81A0A0B4J1V7 117 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 NUDT19A8MXV4 375 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 RPLP1P05386 114 aaKnown RBP9.26□□□□□ -0.93
CLIP2-204ENST00000474962 CRYGBP07316 175 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 UCP1P25874 307 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 SLC6A1P30531 599 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 MAS1LP35410 378 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 UBE2MP61081 183 aaKnown RBP9.26□□□□□ -0.93
CLIP2-204ENST00000474962 RPL8P62917 257 aaKnown RBP9.26□□□□□ -0.93
CLIP2-204ENST00000474962 PRSS8Q16651 343 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 C4orf46Q504U0 113 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 SLC25A42Q86VD7 318 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 PUSL1Q8N0Z8 303 aaKnown RBP9.26□□□□□ -0.93
CLIP2-204ENST00000474962 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 OR4A16Q8NH70 328 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 GRPEL2Q8TAA5 225 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM167AQ8TBQ9 72 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 ARPC1AQ92747 370 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM230Q96A57 120 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 HSPB9Q9BQS6 159 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 COMMD5Q9GZQ3 224 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 ZNF430Q9H8G1 570 aaPredicted RBP9.26□□□□□ -0.93
CLIP2-204ENST00000474962 BET1LQ9NYM9 111 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 TBC1D24Q9ULP9 559 aa9.26□□□□□ -0.93
CLIP2-204ENST00000474962 TRAV6A0A075B6T7 132 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 DUS4LO95620 317 aaKnown RBP9.25□□□□□ -0.93
CLIP2-204ENST00000474962 CDS2O95674 445 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 H2AFB2P0C5Z0 115 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 BTCP35070 178 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 MYCNOSP40205 109 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 PJVKQ0ZLH3 352 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 POU2AF1Q16633 256 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM268Q5VZI3 342 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 TEX38Q6PEX7 206 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 LGI3Q8N145 548 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 CASTOR1Q8WTX7 329 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 GLYATL2Q8WU03 294 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 RBPMSQ93062 196 aaKnown RBP9.25□□□□□ -0.93
CLIP2-204ENST00000474962 RAX2Q96IS3 184 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 P2RX4Q99571 388 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 NUDT15Q9NV35 164 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 FKBP11Q9NYL4 201 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 FLVCR2Q9UPI3 526 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 NUBP2Q9Y5Y2 271 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 WSB1Q9Y6I7 421 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 TNCP24821 2201 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 TENM3Q9P273 2699 aa9.25□□□□□ -0.93
CLIP2-204ENST00000474962 TRAV41A0A0B4J266 112 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 UPK2O00526 184 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 ATP6V0E1O15342 81 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 SFT2D2O95562 160 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 HLA-AP01891 365 aaKnown RBP9.24□□□□□ -0.93
CLIP2-204ENST00000474962 IGF1P05019 195 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 OR4E1P0C645 316 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 HLA-GP17693 338 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 RPL27AP46776 148 aaKnown RBP9.24□□□□□ -0.93
CLIP2-204ENST00000474962 IFITM3Q01628 133 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM187Q14656 261 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 ECSCRQ19T08 205 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 DEFB136Q30KP8 78 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 PLET1Q6UQ28 207 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 UNQ5815/PRO19632Q6UWF5 114 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 COMMD1Q8N668 190 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 SEC22AQ96IW7 307 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 TMEM68Q96MH6 324 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 FYTTD1Q96QD9 318 aaKnown RBP9.24□□□□□ -0.93
CLIP2-204ENST00000474962 SPIN2AQ99865 258 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 SPIN2BQ9BPZ2 258 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 FAM103A1Q9BTL3 118 aaKnown RBP9.24□□□□□ -0.93
CLIP2-204ENST00000474962 PDCD10Q9BUL8 212 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 PRNDQ9UKY0 176 aa9.24□□□□□ -0.93
CLIP2-204ENST00000474962 MSGN1A6NI15 193 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 CCL24O00175 119 aa9.23□□□□□ -0.93
CLIP2-204ENST00000474962 ANXA7P20073 488 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms