RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 OR2B8PP59922 312 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
SCAF11-206ENST00000474828 DHODHQ02127 395 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 TNXAQ16473 311 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 ECSCRQ19T08 205 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-206ENST00000474828 UNQ5815/PRO19632Q6UWF5 114 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 SSX9Q7RTT3 188 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 TTC9CQ8N5M4 171 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 ZNF491Q8N8L2 437 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 GRPEL2Q8TAA5 225 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 FAM110DQ8TAY7 271 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-206ENST00000474828 TMEM56Q96MV1 263 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 SLA2Q9H6Q3 261 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 TMEM14BQ9NUH8 114 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 TMEM56-RWDD3S4R434 201 aa13.19□□□□□ -0.3
SCAF11-206ENST00000474828 TEX13DA0A0J9YY54 714 aaPredicted RBP13.18□□□□□ -0.3
SCAF11-206ENST00000474828 A0A1W2PN81 502 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 ACTL6BO94805 426 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 SERPINE2P07093 398 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 CRYGCP07315 174 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 G6PCP35575 357 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 CHRNA7P36544 502 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 ERVK-16P61578 105 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 GNB1P62873 340 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 AARDQ4LEZ3 155 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 C10orf55Q5SWW7 151 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 ZNF57Q68EA5 555 aaPredicted RBP13.18□□□□□ -0.3
SCAF11-206ENST00000474828 ADAD2Q8NCV1 583 aaKnown RBP13.18□□□□□ -0.3
SCAF11-206ENST00000474828 DMBX1Q8NFW5 382 aa13.18□□□□□ -0.3
SCAF11-206ENST00000474828 NPIPB5A8MRT5 1133 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 NDUFB6O95139 128 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 IGKV1-5P01602 117 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 RPL27AP46776 148 aaKnown RBP13.17□□□□□ -0.3
SCAF11-206ENST00000474828 RBMS2Q15434 407 aaKnown RBP13.17□□□□□ -0.3
SCAF11-206ENST00000474828 THOC7Q6I9Y2 204 aaKnown RBP13.17□□□□□ -0.3
SCAF11-206ENST00000474828 TREML4Q6UXN2 200 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 ZNF695Q8IW36 515 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 WFDC9Q8NEX5 89 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 OR4F17Q8NGA8 305 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 IL22RA2Q969J5 263 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 OR4F4Q96R69 305 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 TSC22D3Q99576 134 aa13.17□□□□□ -0.3
SCAF11-206ENST00000474828 TRBV9A0A0B4J1U6 114 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 I3L521 148 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 OR5AC1P0C628 307 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 OR9G9P0C7N8 305 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 TMEM187Q14656 261 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 SP6Q3SY56 376 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 TMEM128Q5BJH2 165 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 ETV3LQ6ZN32 361 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 ZNF429Q86V71 674 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 LHFPL5Q8TAF8 219 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 WDR12Q9GZL7 423 aaKnown RBP13.16□□□□□ -0.3
SCAF11-206ENST00000474828 NDUFA4L2Q9NRX3 87 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 PRNDQ9UKY0 176 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 ZNF257Q9Y2Q1 563 aa13.16□□□□□ -0.3
SCAF11-206ENST00000474828 WNK1Q9H4A3 2382 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 TEX50A0A1B0GTY4 177 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 IGLC7A0M8Q6 106 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 C15orf61A6NNL5 157 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 ATG12O94817 140 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 UBE2MP61081 183 aaKnown RBP13.15□□□□□ -0.3
SCAF11-206ENST00000474828 FHL3Q13643 280 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 TMEM65Q6PI78 240 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 C18orf65Q6ZTR6 163 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 HSD17B13Q7Z5P4 300 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-206ENST00000474828 SLC25A42Q86VD7 318 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 FAM219AQ8IW50 185 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 SGPP2Q8IWX5 399 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 OR5B3Q8NH48 314 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 ABHD5Q8WTS1 349 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 P2RX4Q99571 388 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 FKBP11Q9NYL4 201 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 KCNIP3Q9Y2W7 256 aa13.15□□□□□ -0.3
SCAF11-206ENST00000474828 A0A0B4J293 547 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 CENPXA8MT69 81 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 PF4V1P10720 104 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 MYOD1P15172 320 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 CTRB1P17538 263 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 INPP1P49441 399 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 CCR6P51684 374 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 ZNF846Q147U1 533 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 CTRB2Q6GPI1 263 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 H2BFWTQ7Z2G1 175 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 SELENOHQ8IZQ5 122 aaKnown RBP13.14□□□□□ -0.31
SCAF11-206ENST00000474828 LRTM2Q8N967 370 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 OR5T1Q8NG75 326 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 OR1L8Q8NGR8 309 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 RBPMSQ93062 196 aaKnown RBP13.14□□□□□ -0.31
SCAF11-206ENST00000474828 QTRT1Q9BXR0 403 aaKnown RBP13.14□□□□□ -0.31
SCAF11-206ENST00000474828 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
SCAF11-206ENST00000474828 INS-IGF2F8WCM5 200 aa13.13□□□□□ -0.31
SCAF11-206ENST00000474828 SNAPC5O75971 98 aa13.13□□□□□ -0.31
SCAF11-206ENST00000474828 PSMB6P28072 239 aa13.13□□□□□ -0.31
SCAF11-206ENST00000474828 MYCNOSP40205 109 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms