RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 SLC6A1P30531 599 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 CHRNA7P36544 502 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 RPL27AP46776 148 aaKnown RBP12.32□□□□□ -0.44
COL1A1-204ENST00000474644 AKR1C2P52895 323 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 FOXE3Q13461 319 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM187Q14656 261 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 LCNL1Q6ZST4 164 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 H2BFWTQ7Z2G1 175 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 SLC25A42Q86VD7 318 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 RNF152Q8N8N0 203 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM56Q96MV1 263 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 SPIN2AQ99865 258 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 SPIN2BQ9BPZ2 258 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 PRR13Q9NZ81 148 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 KCNIP3Q9Y2W7 256 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 NSG2Q9Y328 171 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM56-RWDD3S4R434 201 aa12.32□□□□□ -0.44
COL1A1-204ENST00000474644 A0A1B0GW64 132 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 TCRBV4S1A1TA0A5B7 111 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 CGB1A6NKQ9 187 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 E7EUB6 86 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 OPN1MWP04001 364 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 APELAP0DMC3 54 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 OPN1MW2P0DN77 364 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 OPN1MW3P0DN78 364 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 ANXA3P12429 323 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 VAMP1P23763 118 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 PSMB8P28062 276 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 OR2B8PP59922 312 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 PPP1R1AQ13522 171 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM268Q5VZI3 342 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 SELENOHQ8IZQ5 122 aaKnown RBP12.31□□□□□ -0.44
COL1A1-204ENST00000474644 RBPMSQ93062 196 aaKnown RBP12.31□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM68Q96MH6 324 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 TSC22D3Q99576 134 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 COMMD5Q9GZQ3 224 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 C20orf85Q9H1P6 137 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 PLXNB1O43157 2135 aa12.31□□□□□ -0.44
COL1A1-204ENST00000474644 A0A0G2JRQ6 117 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 SNAPC5O75971 98 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 TCRBP04435 133 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
COL1A1-204ENST00000474644 PF4V1P10720 104 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 UBE2MP61081 183 aaKnown RBP12.3□□□□□ -0.44
COL1A1-204ENST00000474644 IZUMO4Q1ZYL8 232 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 CXorf66Q5JRM2 361 aaPredicted RBP12.3□□□□□ -0.44
COL1A1-204ENST00000474644 KHDC1LQ5JSQ8 128 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 MZT2BQ6NZ67 158 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 NDUFA11Q86Y39 141 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 ZNF695Q8IW36 515 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 OR5M8Q8NGP6 311 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 IL22RA2Q969J5 263 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM14BQ9NUH8 114 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 PRNDQ9UKY0 176 aa12.3□□□□□ -0.44
COL1A1-204ENST00000474644 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
COL1A1-204ENST00000474644 A0A1W2PRX2 142 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 HMX3A6NHT5 357 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 DBX1A6NMT0 343 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 SFT2D2O95562 160 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 ANXA7P20073 488 aaKnown RBP12.29□□□□□ -0.44
COL1A1-204ENST00000474644 RPL23AP62750 156 aaKnown RBP12.29□□□□□ -0.44
COL1A1-204ENST00000474644 SRPXP78539 464 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 NSUN5P1Q3KNT7 163 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 SLC35G3Q8N808 338 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 RNASE11Q8TAA1 199 aaKnown RBP12.29□□□□□ -0.44
COL1A1-204ENST00000474644 FAM110DQ8TAY7 271 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-204ENST00000474644 MYOZ3Q8TDC0 251 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 CASTOR1Q8WTX7 329 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 RRNAD1Q96FB5 475 aaKnown RBP12.29□□□□□ -0.44
COL1A1-204ENST00000474644 KLK15Q9H2R5 256 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 NUDT15Q9NV35 164 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 OR51B2Q9Y5P1 312 aa12.29□□□□□ -0.44
COL1A1-204ENST00000474644 TNCP24821 2201 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 TEX50A0A1B0GTY4 177 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 FAM240BA0A1B0GVZ2 78 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 M0QZ24 198 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 HLA-AP01891 365 aaKnown RBP12.28□□□□□ -0.44
COL1A1-204ENST00000474644 C2orf68Q2NKX9 166 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 ANKRD55Q3KP44 614 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 TMEM65Q6PI78 240 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 FAM219AQ8IW50 185 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 LGI3Q8N145 548 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 OR5T1Q8NG75 326 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 OR5B3Q8NH48 314 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 OR4A16Q8NH70 328 aa12.28□□□□□ -0.44
COL1A1-204ENST00000474644 QTRT1Q9BXR0 403 aaKnown RBP12.28□□□□□ -0.44
COL1A1-204ENST00000474644 TRAV6A0A075B6T7 132 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 A0A0B4J293 547 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 IGLC7A0M8Q6 106 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 C9orf170A2RU37 121 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 H3BUA1 57 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 OR4E1P0C645 316 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 AREGP15514 252 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 RAB9AP51151 201 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 THOC7Q6I9Y2 204 aaKnown RBP12.27□□□□□ -0.45
COL1A1-204ENST00000474644 C18orf65Q6ZTR6 163 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 ZNF429Q86V71 674 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms