RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 VSTM2AQ8TAG5 236 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 CD300LFQ8TDQ1 290 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 DCUN1D4Q92564 292 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 ZNF486Q96H40 463 aaPredicted RBP11.72□□□□□ -0.53
VARS-223ENST00000474643 SLC25A21Q9BQT8 299 aaPredicted RBP11.72□□□□□ -0.53
VARS-223ENST00000474643 AIFM2Q9BRQ8 373 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 ALX4Q9H161 411 aaPredicted RBP11.72□□□□□ -0.53
VARS-223ENST00000474643 SLA2Q9H6Q3 261 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 FBXO7Q9Y3I1 522 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 SMAD5-AS1Q9Y6J3 95 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 U3KQK5 164 aa11.72□□□□□ -0.53
VARS-223ENST00000474643 COL7A1Q02388 2944 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 C13orf42A0A1B0GVH6 325 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 MPPED1O15442 326 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 PGLYRP1O75594 196 aaPredicted RBP11.71□□□□□ -0.53
VARS-223ENST00000474643 OR2A4O95047 310 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 CRYGBP07316 175 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 LGALS1P09382 135 aaKnown RBP11.71□□□□□ -0.53
VARS-223ENST00000474643 SLURP1P55000 103 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 ASAH1Q13510 395 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 PRSS8Q16651 343 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 AKIRIN2Q53H80 203 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 MMD2Q8IY49 270 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 SLC38A6Q8IZM9 456 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 OR4D10Q8NGI6 311 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 OR2A7Q96R45 310 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 OR4C12Q96R67 309 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 ASCL2Q99929 193 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 RSRP1Q9BUV0 290 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 ELOVL1Q9BW60 279 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 NUBP2Q9Y5Y2 271 aa11.71□□□□□ -0.53
VARS-223ENST00000474643 ARPC1BO15143 372 aaKnown RBP11.7□□□□□ -0.54
VARS-223ENST00000474643 HPRT1P00492 218 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 CRIP2P52943 208 aaPredicted RBP11.7□□□□□ -0.54
VARS-223ENST00000474643 DEFA1P59665 94 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 DEFA3P59666 94 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 ERVK-16P61578 105 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 MZT2BQ6NZ67 158 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 DMBX1Q8NFW5 382 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 ZFAND1Q8TCF1 268 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 RHOVQ96L33 236 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 ZNF430Q9H8G1 570 aaPredicted RBP11.7□□□□□ -0.54
VARS-223ENST00000474643 COPZ2Q9P299 210 aa11.7□□□□□ -0.54
VARS-223ENST00000474643 IGHV4OR15-8A0A075B7B6 117 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 A0A087WW49 117 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 PLA2G10O15496 165 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
VARS-223ENST00000474643 LYRM1O43325 122 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 SOX15O60248 233 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 KBTBD11O94819 623 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 HSPB1P04792 205 aaKnown RBP11.69□□□□□ -0.54
VARS-223ENST00000474643 APELAP0DMC3 54 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 EGR2P11161 476 aaPredicted RBP11.69□□□□□ -0.54
VARS-223ENST00000474643 NQO2P16083 231 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 OR5T1Q8NG75 326 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 OR51S1Q8NGJ8 323 aa11.69□□□□□ -0.54
VARS-223ENST00000474643 DLX4Q92988 240 aaPredicted RBP11.69□□□□□ -0.54
VARS-223ENST00000474643 LSM4Q9Y4Z0 139 aaKnown RBP11.69□□□□□ -0.54
VARS-223ENST00000474643 A0A0G2JLM5 398 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 MSGN1A6NI15 193 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 B3GALNT1O75752 331 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 S1PR2O95136 353 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 RPA2P15927 270 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 F2RP25116 425 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 BRWD1-AS2P59051 145 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 TAS2R31P59538 309 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 RND3P61587 244 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 KIAA0141Q14154 515 aaPredicted RBP11.68□□□□□ -0.54
VARS-223ENST00000474643 RBMS2Q15434 407 aaKnown RBP11.68□□□□□ -0.54
VARS-223ENST00000474643 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 FAAP20Q6NZ36 180 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 TBC1D26Q86UD7 250 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
VARS-223ENST00000474643 TMEM68Q96MH6 324 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 FAM212BQ9NTI7 297 aaPredicted RBP11.68□□□□□ -0.54
VARS-223ENST00000474643 MCUBQ9NWR8 336 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 COA4Q9NYJ1 87 aa11.68□□□□□ -0.54
VARS-223ENST00000474643 CTSDP07339 412 aaPredicted RBP11.67□□□□□ -0.54
VARS-223ENST00000474643 PI3P19957 117 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 LPAR6P43657 344 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 IFITM3Q01628 133 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 C19orf54Q5BKX5 351 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 PUSL1Q8N0Z8 303 aaKnown RBP11.67□□□□□ -0.54
VARS-223ENST00000474643 OR13C8Q8NGS7 320 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 OR4A5Q8NH83 315 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 TMEM167AQ8TBQ9 72 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 FYTTD1Q96QD9 318 aaKnown RBP11.67□□□□□ -0.54
VARS-223ENST00000474643 SPIN2AQ99865 258 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 SPIN2BQ9BPZ2 258 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 PLEKHA2Q9HB19 425 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 RANGRFQ9HD47 186 aaPredicted RBP11.67□□□□□ -0.54
VARS-223ENST00000474643 COMMD9Q9P000 198 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 TBC1D24Q9ULP9 559 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 GPR132Q9UNW8 380 aa11.67□□□□□ -0.54
VARS-223ENST00000474643 H3BUA1 57 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 NDUFB6O95139 128 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 GP9P14770 177 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 SPNP16150 400 aa11.66□□□□□ -0.54
VARS-223ENST00000474643 ZP3P21754 424 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms