RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 LRRC29Q8WV35 223 aa11.92□□□□□ -0.5
NELFCD-204ENST00000474543 MGST2Q99735 147 aa11.92□□□□□ -0.5
NELFCD-204ENST00000474543 MS4A5Q9H3V2 200 aa11.92□□□□□ -0.5
NELFCD-204ENST00000474543 HEYLQ9NQ87 328 aaPredicted RBP11.92□□□□□ -0.5
NELFCD-204ENST00000474543 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
NELFCD-204ENST00000474543 PXMP4Q9Y6I8 212 aa11.92□□□□□ -0.5
NELFCD-204ENST00000474543 TRBV20OR9-2A0A075B6H5 130 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 RBFOX2O43251 390 aaKnown RBP eCLIP11.91□□□□□ -0.5
NELFCD-204ENST00000474543 CECR9P0C854 216 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 STAG3L2P0CL84 134 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 STAG3L3P0CL85 134 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 HOXC12P31275 282 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 CCKARP32238 428 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 TAS2R60P59551 318 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 MIC13Q5XKP0 118 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 FAM90A1Q86YD7 464 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
NELFCD-204ENST00000474543 OR52E5Q8NH55 327 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 MISP3Q96FF7 219 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 SDSLQ96GA7 329 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 SFRP2Q96HF1 295 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 NDUFAF3Q9BU61 184 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 TRAV3A0A0B4J244 114 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 M0R1X1 148 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 NDUFB7P17568 137 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 KIR2DL2P43627 348 aaPredicted RBP11.91□□□□□ -0.5
NELFCD-204ENST00000474543 RELBQ01201 579 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 SSX2Q16385 188 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 ZNF718Q3SXZ3 478 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 PDLIM3Q53GG5 364 aaPredicted RBP11.91□□□□□ -0.5
NELFCD-204ENST00000474543 RPL39P5Q59GN2 51 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 VWA1Q6PCB0 445 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 ABHD12Q8N2K0 398 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 ZNF843Q8N446 348 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 SGMS2Q8NHU3 365 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 BTF3L4Q96K17 158 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 TXNDC17Q9BRA2 123 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 GGTLC1Q9BX51 225 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 GNG12Q9UBI6 72 aa11.91□□□□□ -0.5
NELFCD-204ENST00000474543 RP1L1Q8IWN7 2480 aaPredicted RBP11.9□□□□□ -0.5
NELFCD-204ENST00000474543 LBHQ53QV2 105 aaPredicted RBP11.9□□□□□ -0.5
NELFCD-204ENST00000474543 BEND2Q8NDZ0 799 aa11.9□□□□□ -0.5
NELFCD-204ENST00000474543 WFIKKN1Q96NZ8 548 aa11.9□□□□□ -0.5
NELFCD-204ENST00000474543 TMEM204Q9BSN7 226 aa11.9□□□□□ -0.5
NELFCD-204ENST00000474543 ELOVL5Q9NYP7 299 aa11.9□□□□□ -0.5
NELFCD-204ENST00000474543 JPT1Q9UK76 154 aa11.9□□□□□ -0.5
NELFCD-204ENST00000474543 IGKV1D-17A0A075B6S4 117 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 MDFIC2A0A1B0GVS7 189 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 AQP7O14520 342 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 YPEL1O60688 119 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 CXorf1O96002 111 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 IGHG3P01860 377 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 SNRPCP09234 159 aaKnown RBP11.89□□□□□ -0.51
NELFCD-204ENST00000474543 OR4A8P0C604 315 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 GCH1P30793 250 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 ZNF134P52741 427 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 DMRTC2Q8IXT2 367 aaPredicted RBP11.89□□□□□ -0.51
NELFCD-204ENST00000474543 Q8NA96 180 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 C1orf159Q96HA4 380 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 YPEL2Q96QA6 119 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 A0A1B0GWJ7 208 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 SCO2A0A1W2PP80 73 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 IGHV3-13P01766 116 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 IGHV3-7P01780 117 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 LOXL3P58215 753 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 ERVK-16P61578 105 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 MBNL2Q5VZF2 373 aaKnown RBP11.89□□□□□ -0.51
NELFCD-204ENST00000474543 TMEM256Q8N2U0 113 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
NELFCD-204ENST00000474543 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
NELFCD-204ENST00000474543 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 A0A1B0GUS0 222 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 NBASA2RRP1 2371 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 NUPR1O60356 82 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 CR1LQ2VPA4 569 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 TCF23Q7RTU1 214 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 C9orf106Q8NAJ2 232 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 IFI27L2Q9H2X8 130 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 TMEM140Q9NV12 185 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 DUSP13Q9UII6 198 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 TCF19Q9Y242 345 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 LSM4Q9Y4Z0 139 aaKnown RBP11.88□□□□□ -0.51
NELFCD-204ENST00000474543 YTHDF2Q9Y5A9 579 aaKnown RBP11.88□□□□□ -0.51
NELFCD-204ENST00000474543 SVILO95425 2214 aa11.88□□□□□ -0.51
NELFCD-204ENST00000474543 INTS1Q8N201 2190 aaKnown RBP11.88□□□□□ -0.51
NELFCD-204ENST00000474543 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 IGLV1-44P01699 117 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 TIMP3P35625 211 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 C1orf229Q6ZS94 237 aaPredicted RBP11.87□□□□□ -0.51
NELFCD-204ENST00000474543 OR2Z1Q8NG97 314 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 SSMEM1Q8WWF3 244 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 S1PR3Q99500 378 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 NPVFQ9HCQ7 196 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
NELFCD-204ENST00000474543 IGHV1-18A0A0C4DH31 117 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms