RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 FGF2P09038 288 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 TRAPPC2P0DI81 140 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 TRAPPC2BP0DI82 140 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 OPN1MW2P0DN77 364 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 OPN1MW3P0DN78 364 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 CXCL3P19876 107 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 MAS1LP35410 378 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 RPL27AP46776 148 aaKnown RBP6.63□□□□□ -1.35
CNN3-205ENST00000474409 HOXA1P49639 335 aaPredicted RBP6.63□□□□□ -1.35
CNN3-205ENST00000474409 H2BFSP57053 126 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 CD83Q01151 205 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 GRPEL2Q8TAA5 225 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 ARPC1AQ92747 370 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 C2orf50Q96LR7 162 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 HINT2Q9BX68 163 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 ZNF436Q9C0F3 470 aaPredicted RBP6.63□□□□□ -1.35
CNN3-205ENST00000474409 NPFFR1Q9GZQ6 430 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 ENY2Q9NPA8 101 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 ESM1Q9NQ30 184 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 PLSCR3Q9NRY6 295 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.63□□□□□ -1.35
CNN3-205ENST00000474409 FKBP11Q9NYL4 201 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 FOXA2Q9Y261 457 aaPredicted RBP6.63□□□□□ -1.35
CNN3-205ENST00000474409 MAST4O15021 2626 aa6.63□□□□□ -1.35
CNN3-205ENST00000474409 MXRA5Q9NR99 2828 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 HMX3A6NHT5 357 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 CEBPZOSA8MTT3 80 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 CLDN34H7C241 214 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 TRIM77I1YAP6 450 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 KCNAB3O43448 404 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 MED6O75586 246 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 CRYBA1P05813 215 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 RNASE1P07998 156 aaKnown RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 PET100P0DJ07 73 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 MYOD1P15172 320 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 NKX2-1P43699 371 aaPredicted RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 COMPP49747 757 aaPredicted RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 UBA52P62987 128 aaKnown RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 CYCSP99999 105 aaKnown RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 PJVKQ0ZLH3 352 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 LRRC37A5PQ49AS3 106 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 SPINK9Q5DT21 86 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 C10orf55Q5SWW7 151 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 Q6ZRM9 215 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 AKAP14Q86UN6 197 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 ZNF429Q86V71 674 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 MRPL41Q8IXM3 137 aaKnown RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 OR4D5Q8NGN0 318 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 OR1L8Q8NGR8 309 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 OR5B3Q8NH48 314 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 SRSF12Q8WXF0 261 aaKnown RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 ASB13Q8WXK3 278 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 FYTTD1Q96QD9 318 aaKnown RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 HSPB9Q9BQS6 159 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 NMES1Q9C002 83 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 PLEKHA3Q9HB20 300 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 PARP11Q9NR21 331 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 TMEM14BQ9NUH8 114 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 CACFD1Q9UGQ2 172 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 ZNF257Q9Y2Q1 563 aa6.62□□□□□ -1.35
CNN3-205ENST00000474409 LSM5Q9Y4Y9 91 aaKnown RBP6.62□□□□□ -1.35
CNN3-205ENST00000474409 IGHV7-81A0A0B4J1V7 117 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 FAM90A26D6RGX4 464 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 FCN1O00602 326 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 SSSCA1O60232 199 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 PITX3O75364 302 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 CCNKO75909 580 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 AMY1AP04745 511 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 IL6RP08887 468 aaPredicted RBP6.61□□□□□ -1.35
CNN3-205ENST00000474409 SPCS3P61009 180 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 CX3CL1P78423 397 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 PRCDQ00LT1 54 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 TNFRSF9Q07011 255 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 FXYD3Q14802 87 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 ECSCRQ19T08 205 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 SLC35E3Q7Z769 313 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 OR52E5Q8NH55 327 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 FAM103A1Q9BTL3 118 aaKnown RBP6.61□□□□□ -1.35
CNN3-205ENST00000474409 PRSS22Q9GZN4 317 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 MAGT1Q9H0U3 335 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 ZFP57Q9NU63 452 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 HSPB7Q9UBY9 170 aa6.61□□□□□ -1.35
CNN3-205ENST00000474409 RCL1Q9Y2P8 373 aaKnown RBP6.61□□□□□ -1.35
CNN3-205ENST00000474409 TEP1Q99973 2627 aaKnown RBP6.61□□□□□ -1.35
CNN3-205ENST00000474409 TEX50A0A1B0GTY4 177 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 A0A1W2PN81 502 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 FAM181BA6NEQ2 426 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 K7EPK0 472 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 L7N2F9 121 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 ATP6V0E1O15342 81 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 MBPP02686 304 aaPredicted RBP6.6□□□□□ -1.35
CNN3-205ENST00000474409 APELAP0DMC3 54 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 IAPPP10997 89 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 PVALBP20472 110 aaPredicted RBP6.6□□□□□ -1.35
CNN3-205ENST00000474409 CHRNA7P36544 502 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 RAP2BP61225 183 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 RPL15P61313 204 aaKnown RBP6.6□□□□□ -1.35
CNN3-205ENST00000474409 HSPE1P61604 102 aaKnown RBP6.6□□□□□ -1.35
CNN3-205ENST00000474409 BLCAPP62952 87 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms