RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CT45A7P0DMV0 189 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CFHR2P36980 270 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CLDN2P57739 230 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 HBG1P69891 147 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 HBG2P69892 147 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 KLF5Q13887 457 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CT45A1Q5HYN5 189 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 SLC25A47Q6Q0C1 308 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 Q6ZUT4 128 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 FAM57BQ71RH2 274 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CA13Q8N1Q1 262 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 OR1F12Q8NHA8 337 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CT45A3Q8NHU0 189 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 OVCA2Q8WZ82 227 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 DAZLQ92904 295 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CNRIP1Q96F85 164 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 RAB40CQ96S21 281 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 AMELYQ99218 206 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 LIN7CQ9NUP9 197 aaKnown RBP4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 COL4A3Q01955 1670 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 BMPR1BO00238 502 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 BGLAPP02818 100 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CCL5P13501 91 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 SSR2P43308 183 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CX3CL1P78423 397 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 CTXN3Q4LDR2 81 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 PDLIM3Q53GG5 364 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 OOSP2Q86WS3 158 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 NHLRC2Q8NBF2 726 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 OR4X2Q8NGF9 303 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 OR9G4Q8NGQ1 327 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 ADAT3Q96EY9 351 aaPredicted RBP4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 TM2D2Q9BX73 214 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 ANXA10Q9UJ72 324 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 KCNS2Q9ULS6 477 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 B9D1Q9UPM9 204 aa4.26□□□□□ -1.73
TMEM39A-206ENST00000473684 MBLAC1A4D2B0 266 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 F5H5K5 113 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SYS1-DBNDD2H3BUS1 97 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 PTGESO14684 152 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SLC16A7O60669 478 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 PAGE4O60829 102 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SRSF10O75494 262 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 NPPCP23582 126 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 PAX9P55771 341 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 NXPH1P58417 271 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 PLP2Q04941 152 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 ATP5G2Q06055 141 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 DPTQ07507 201 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 MYBPHQ13203 477 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 OR8B8Q15620 311 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM215Q68D42 235 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SLC48A1Q6P1K1 146 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 RASL11AQ6T310 242 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 Q6ZS92 163 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 MMD2Q8IY49 270 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 ZADH2Q8N4Q0 377 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 RPP25LQ8N5L8 163 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 TEX29Q8N6K0 151 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF525Q8N782 197 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 OR1L1Q8NH94 360 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM222Q9H0R3 208 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SAP30LQ9HAJ7 183 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 B4GALT7Q9UBV7 327 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 Q9Y3F1 56 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 hDV102S1A0JD36 115 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 LINC01553A4QN01 128 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 FOXI3A8MTJ6 420 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SPRY2O43597 315 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 CHST1O43916 411 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SCGB2A1O75556 95 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 UQCRFS1P47985 274 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 GNB1P62873 340 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 ZXDAP98168 799 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SRSF1Q07955 248 aaKnown RBP eCLIP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 EIF3IQ13347 325 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 FAM69BQ5VUD6 431 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 PARM1Q6UWI2 310 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF547Q8IVP9 402 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 OR10G9Q8NGN4 311 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 IL17DQ8TAD2 202 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SSC4DQ8WTU2 575 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 CLDN23Q96B33 292 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF689Q96CS4 500 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF501Q96CX3 271 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 C1orf147Q96MC9 270 aaPredicted RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 SLC25A33Q9BSK2 321 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 PPDPFQ9H3Y8 114 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 OR2W1Q9Y3N9 320 aa4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 TNRC6AQ8NDV7 1962 aaKnown RBP4.25□□□□□ -1.73
TMEM39A-206ENST00000473684 TRGV10A0A0A0MS01 117 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A1W2PRD5 423 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A1W2PRF3 423 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 A0A1W2PRM7 423 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 TMEM8BA6NDV4 472 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 ZNF850A8MQ14 1090 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 NPIPB5A8MRT5 1133 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 KLF7O75840 302 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 APCSP02743 223 aa4.24□□□□□ -1.73
TMEM39A-206ENST00000473684 MT-ATP8P03928 68 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms