RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 VAX1Q5SQQ9 334 aa17.24■□□□□ 0.35
PTP4A1-203ENST00000473334 C19orf35Q6ZS72 473 aa17.24■□□□□ 0.35
PTP4A1-203ENST00000473334 SMAD5-AS1Q9Y6J3 95 aa17.24■□□□□ 0.35
PTP4A1-203ENST00000473334 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 TRAV3A0A0B4J244 114 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 CGB1A6NKQ9 187 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 DHFRP00374 187 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 IGLV1-51P01701 117 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 FGF2P09038 288 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 CTRB1P17538 263 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 ERVK-16P61578 105 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 FAM209BQ5JX69 171 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 CTRB2Q6GPI1 263 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 LPCAT3Q6P1A2 487 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 HAPLN4Q86UW8 402 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 DGCR14Q96DF8 476 aaKnown RBP17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 EXTL2Q9UBQ6 330 aa17.23■□□□□ 0.35
PTP4A1-203ENST00000473334 BMPR1BO00238 502 aa17.22■□□□□ 0.35
PTP4A1-203ENST00000473334 OR2B8PP59922 312 aa17.22■□□□□ 0.35
PTP4A1-203ENST00000473334 FANCD2OSQ96PS1 177 aa17.22■□□□□ 0.35
PTP4A1-203ENST00000473334 COMMD5Q9GZQ3 224 aa17.22■□□□□ 0.35
PTP4A1-203ENST00000473334 FBXL7Q9UJT9 491 aa17.22■□□□□ 0.35
PTP4A1-203ENST00000473334 MARCH11A6NNE9 402 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 TPPPO94811 219 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 NHLRC4P0CG21 123 aaPredicted RBP17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 RPA2P15927 270 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 S100GP29377 79 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 LPAR6P43657 344 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 KLK9Q2XQG4 91 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 PHLDA2Q53GA4 152 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 RNASE12Q5GAN4 147 aaKnown RBP17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 IL34Q6ZMJ4 242 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 FCAMRQ8WWV6 532 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 KLK9Q9UKQ9 250 aa17.21■□□□□ 0.35
PTP4A1-203ENST00000473334 REG1AP05451 166 aa17.2■□□□□ 0.34
PTP4A1-203ENST00000473334 HIST1H1BP16401 226 aaKnown RBP17.2■□□□□ 0.34
PTP4A1-203ENST00000473334 UCP3P55916 312 aa17.2■□□□□ 0.34
PTP4A1-203ENST00000473334 ZNF585BQ52M93 769 aa17.2■□□□□ 0.34
PTP4A1-203ENST00000473334 SRSF8Q9BRL6 282 aaKnown RBP17.2■□□□□ 0.34
PTP4A1-203ENST00000473334 KLK11Q9UBX7 282 aa17.2■□□□□ 0.34
PTP4A1-203ENST00000473334 IGLC7A0M8Q6 106 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 M0QYG6 137 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 NDUFB8O95169 186 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 DEFA4P12838 97 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 SPCS2Q15005 226 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 THOC7Q6I9Y2 204 aaKnown RBP17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 CLVS1Q8IUQ0 354 aaPredicted RBP17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 SLC38A6Q8IZM9 456 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 CADM3Q8N126 398 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 OR52I2Q8NH67 350 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 C15orf40Q8WUR7 153 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 QTRT1Q9BXR0 403 aaKnown RBP17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 SIGLEC8Q9NYZ4 499 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 PEMTQ9UBM1 199 aa17.19■□□□□ 0.34
PTP4A1-203ENST00000473334 CSN3P07498 182 aa17.18■□□□□ 0.34
PTP4A1-203ENST00000473334 RAB2BQ8WUD1 216 aa17.18■□□□□ 0.34
PTP4A1-203ENST00000473334 MIXL1Q9H2W2 232 aa17.18■□□□□ 0.34
PTP4A1-203ENST00000473334 FAM212BQ9NTI7 297 aaPredicted RBP17.18■□□□□ 0.34
PTP4A1-203ENST00000473334 MTFP1Q9UDX5 166 aa17.18■□□□□ 0.34
PTP4A1-203ENST00000473334 IGLV11-55A0A075B6I3 123 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 PPP5D1E7EU14 171 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 RGS5O15539 181 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 KRASP01116 189 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 IFNA6P05013 189 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 G6PCP35575 357 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 RNASE10Q5GAN6 216 aaKnown RBP17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 TBC1D26Q86UD7 250 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 EEF1AKMT3Q96AZ1 226 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 ABHD1Q96SE0 405 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 DMRT1Q9Y5R6 373 aa17.17■□□□□ 0.34
PTP4A1-203ENST00000473334 H0Y980 276 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 GGCTO75223 188 aaKnown RBP17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 TRAPPC2P0DI81 140 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 TRAPPC2BP0DI82 140 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 TBPP20226 339 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 LAX1Q8IWV1 398 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 OR1L8Q8NGR8 309 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 CCDC140Q96MF4 163 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 ASCL2Q99929 193 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 BCL7BQ9BQE9 202 aa17.16■□□□□ 0.34
PTP4A1-203ENST00000473334 TEX50A0A1B0GTY4 177 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 SNAPC5O75971 98 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 IGHV3-23P01764 117 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 CD3DP04234 171 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 TMBIM6P55061 237 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 HSD17B13Q7Z5P4 300 aaPredicted RBP17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 ARRDC1Q8N5I2 433 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 OR10W1Q8NGF6 305 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 CXorf58Q96LI9 332 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 S4R3C0 116 aa17.15■□□□□ 0.34
PTP4A1-203ENST00000473334 CTDSP2O14595 271 aa17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 ARL3P36405 182 aa17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 LCN12Q6JVE5 192 aa17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 CLEC19AQ6UXS0 136 aa17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 LHFPL1Q86WI0 220 aa17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 TSC22D3Q99576 134 aa17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 THYN1Q9P016 225 aa17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 CCDC59Q9P031 241 aaKnown RBP17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 NSG2Q9Y328 171 aa17.14■□□□□ 0.33
PTP4A1-203ENST00000473334 OR51B2Q9Y5P1 312 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms