RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PXMP4Q9Y6I8 212 aa1.23□□□□□ -2.21
CLK1-209ENST00000472679 KIF24Q5T7B8 1368 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 I3L521 148 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 EVX1P49640 407 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 RAB13P51153 203 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 C5orf46Q6UWT4 87 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 HIST2H3AQ71DI3 136 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 COMMD7Q86VX2 200 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 TBC1D19Q8N5T2 526 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 XAGE1AQ9HD64 81 aa1.22□□□□□ -2.21
CLK1-209ENST00000472679 ARFGEF3Q5TH69 2177 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 ITGB1BP1O14713 200 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 HLA-DMBP28068 263 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 CSN1S1P47710 185 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 REG1BP48304 166 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 SLC51BQ86UW2 128 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 ZNF676Q8N7Q3 588 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 OR5B17Q8NGF7 314 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 MED9Q9NWA0 146 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 GLI3P10071 1580 aa1.21□□□□□ -2.22
CLK1-209ENST00000472679 POLEQ07864 2286 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 HEATR5AQ86XA9 2040 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 IGHV1-69-2A0A0G2JMI3 117 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 OR4C45A6NMZ5 311 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 KRT75O95678 551 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 MSMBP08118 114 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 HAAOP46952 286 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 PLCXD2Q0VAA5 305 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 RSU1Q15404 277 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 RPS19BP1Q86WX3 136 aaKnown RBP1.2□□□□□ -2.22
CLK1-209ENST00000472679 OR1M1Q8NGA1 313 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 CMTM5Q96DZ9 223 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 CFAP53Q96M91 514 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 AK3Q9UIJ7 227 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 TECTAO75443 2155 aa1.2□□□□□ -2.22
CLK1-209ENST00000472679 PFDN6O15212 129 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 COX5BP10606 129 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 S100A7P31151 101 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 CCR7P32248 378 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 MAP2K4P45985 399 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 BLVRAP53004 296 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 MLLT11Q13015 90 aaPredicted RBP1.19□□□□□ -2.22
CLK1-209ENST00000472679 OR8B3Q8NGG8 313 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 ANKRD7Q92527 254 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 ERMAPQ96PL5 475 aaPredicted RBP1.19□□□□□ -2.22
CLK1-209ENST00000472679 LHFPL6Q9Y693 200 aa1.19□□□□□ -2.22
CLK1-209ENST00000472679 SETD5Q9C0A6 1442 aa1.18□□□□□ -2.22
CLK1-209ENST00000472679 DISC1C4P0D8 188 aa1.18□□□□□ -2.22
CLK1-209ENST00000472679 SSNA1O43805 119 aa1.18□□□□□ -2.22
CLK1-209ENST00000472679 RPL12P30050 165 aaKnown RBP1.18□□□□□ -2.22
CLK1-209ENST00000472679 OR4D2P58180 307 aa1.18□□□□□ -2.22
CLK1-209ENST00000472679 TMEM156Q8N614 296 aa1.18□□□□□ -2.22
CLK1-209ENST00000472679 PAQR5Q9NXK6 330 aaPredicted RBP1.18□□□□□ -2.22
CLK1-209ENST00000472679 TONSLQ96HA7 1378 aa1.18□□□□□ -2.22
CLK1-209ENST00000472679 TRBV10-2A0A0K0K1G8 114 aa1.17□□□□□ -2.22
CLK1-209ENST00000472679 C1orf232A0A0U1RR37 186 aa1.17□□□□□ -2.22
CLK1-209ENST00000472679 IL9P15248 144 aa1.17□□□□□ -2.22
CLK1-209ENST00000472679 PDPK2PQ6A1A2 396 aa1.17□□□□□ -2.22
CLK1-209ENST00000472679 ZNF439Q8NDP4 499 aa1.17□□□□□ -2.22
CLK1-209ENST00000472679 FKBP14Q9NWM8 211 aa1.17□□□□□ -2.22
CLK1-209ENST00000472679 FUT9Q9Y231 359 aa1.17□□□□□ -2.22
CLK1-209ENST00000472679 CACNA1BQ00975 2339 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 EVPLLA8MZ36 301 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 HCRTO43612 131 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 C8orf88P0DMB2 117 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 SULT1A3P0DMM9 295 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 SULT1A4P0DMN0 295 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 POLR2GP62487 172 aaKnown RBP eCLIP1.16□□□□□ -2.22
CLK1-209ENST00000472679 FABP9Q0Z7S8 132 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 C1orf195Q5TG92 126 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 ZNF550Q7Z398 422 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 DCXRQ7Z4W1 244 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 DHFR2Q86XF0 187 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 FAM9CQ8IZT9 166 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 OR51I2Q9H344 312 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 NOTCH1P46531 2555 aa1.16□□□□□ -2.22
CLK1-209ENST00000472679 GGT3PA6NGU5 568 aa1.15□□□□□ -2.23
CLK1-209ENST00000472679 CXCR6O00574 342 aa1.15□□□□□ -2.23
CLK1-209ENST00000472679 FAM228BP0C875 321 aa1.15□□□□□ -2.23
CLK1-209ENST00000472679 UBBP0CG47 229 aa1.15□□□□□ -2.23
CLK1-209ENST00000472679 MAP3K7CLP57077 242 aa1.15□□□□□ -2.23
CLK1-209ENST00000472679 MED21Q13503 144 aa1.15□□□□□ -2.23
CLK1-209ENST00000472679 DIRAS2Q96HU8 199 aa1.15□□□□□ -2.23
CLK1-209ENST00000472679 REG4Q9BYZ8 158 aa1.15□□□□□ -2.23
CLK1-209ENST00000472679 RSL24D1Q9UHA3 163 aaKnown RBP1.15□□□□□ -2.23
CLK1-209ENST00000472679 ABCC11Q96J66 1382 aa1.14□□□□□ -2.23
CLK1-209ENST00000472679 SLC22A1O15245 554 aa1.14□□□□□ -2.23
CLK1-209ENST00000472679 IGHV3-7P01780 117 aa1.14□□□□□ -2.23
CLK1-209ENST00000472679 SUPT4H1P63272 117 aaKnown RBP1.14□□□□□ -2.23
CLK1-209ENST00000472679 ODF3Q96PU9 254 aa1.14□□□□□ -2.23
CLK1-209ENST00000472679 BAIAP2Q9UQB8 552 aa1.14□□□□□ -2.23
CLK1-209ENST00000472679 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
CLK1-209ENST00000472679 IGKV2D-26A0A0A0MRZ7 120 aa1.13□□□□□ -2.23
CLK1-209ENST00000472679 TMEM212A6NML5 194 aa1.13□□□□□ -2.23
CLK1-209ENST00000472679 SDCBPO00560 298 aaPredicted RBP1.13□□□□□ -2.23
CLK1-209ENST00000472679 SRP19P09132 144 aaKnown RBP1.13□□□□□ -2.23
CLK1-209ENST00000472679 CD151P48509 253 aa1.13□□□□□ -2.23
CLK1-209ENST00000472679 ZNF345Q14585 488 aa1.13□□□□□ -2.23
CLK1-209ENST00000472679 C10orf55Q5SWW7 151 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms