RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ENY2Q9NPA8 101 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 CACNG5Q9UF02 275 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 NSG2Q9Y328 171 aa13.36□□□□□ -0.27
CCM2-205ENST00000472223 IGHV7-81A0A0B4J1V7 117 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 C7orf66A4D0T2 115 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 C15orf61A6NNL5 157 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 ADAP1O75689 374 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 NDUFA7O95182 113 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 IL6RP08887 468 aaPredicted RBP13.35□□□□□ -0.27
CCM2-205ENST00000472223 COMPP49747 757 aaPredicted RBP13.35□□□□□ -0.27
CCM2-205ENST00000472223 OR2B8PP59922 312 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 RELBQ01201 579 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 NMSQ5H8A3 153 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 ZNF429Q86V71 674 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 TMEM68Q96MH6 324 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 FYTTD1Q96QD9 318 aaKnown RBP13.35□□□□□ -0.27
CCM2-205ENST00000472223 HINT2Q9BX68 163 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 COA4Q9NYJ1 87 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
CCM2-205ENST00000472223 ZNF257Q9Y2Q1 563 aa13.35□□□□□ -0.27
CCM2-205ENST00000472223 TRAV3A0A0B4J244 114 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 A0A1B0GUS0 222 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 OPN1MWP04001 364 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 TRAPPC2P0DI81 140 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 TRAPPC2BP0DI82 140 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 OPN1MW2P0DN77 364 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 OPN1MW3P0DN78 364 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 HSPE1P61604 102 aaKnown RBP13.34□□□□□ -0.27
CCM2-205ENST00000472223 SLC35B1P78383 322 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 Q6ZSV7 163 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 HSD17B13Q7Z5P4 300 aaPredicted RBP13.34□□□□□ -0.27
CCM2-205ENST00000472223 SRSF12Q8WXF0 261 aaKnown RBP13.34□□□□□ -0.27
CCM2-205ENST00000472223 HSPB9Q9BQS6 159 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 QTRT1Q9BXR0 403 aaKnown RBP13.34□□□□□ -0.27
CCM2-205ENST00000472223 ZNF702PQ9H963 129 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 TMEM14BQ9NUH8 114 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 ZFHX3Q15911 3703 aa13.34□□□□□ -0.27
CCM2-205ENST00000472223 A0A0B4J293 547 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 TEX50A0A1B0GTY4 177 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 A0A1W2PN81 502 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 MSGN1A6NI15 193 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 DBX1A6NMT0 343 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 GOSR2O14653 212 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 MED6O75586 246 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 P0C879 139 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 HKR1P10072 659 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 CHRNA7P36544 502 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 SRSF2Q01130 221 aaKnown RBP13.33□□□□□ -0.28
CCM2-205ENST00000472223 FOXL1Q12952 345 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 IZUMO4Q1ZYL8 232 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 IAH1Q2TAA2 248 aaPredicted RBP13.33□□□□□ -0.28
CCM2-205ENST00000472223 CENPVQ7Z7K6 275 aaPredicted RBP13.33□□□□□ -0.28
CCM2-205ENST00000472223 Q8N2B8 174 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 SGMS2Q8NHU3 365 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 C16orf95Q9H693 158 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 PLEKHA3Q9HB20 300 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 GSKIPQ9P0R6 139 aa13.33□□□□□ -0.28
CCM2-205ENST00000472223 A0A0G2JRQ6 117 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 WRBO00258 174 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 ATP6V0E1O15342 81 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 CYB5BO43169 146 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 ST8SIA3O43173 380 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 IGF1P05019 195 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 SPCS3P61009 180 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 ERHP84090 104 aaKnown RBP13.32□□□□□ -0.28
CCM2-205ENST00000472223 CYCSP99999 105 aaKnown RBP13.32□□□□□ -0.28
CCM2-205ENST00000472223 ECSCRQ19T08 205 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 UNQ5815/PRO19632Q6UWF5 114 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 OR52E5Q8NH55 327 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 SRSF8Q9BRL6 282 aaKnown RBP13.32□□□□□ -0.28
CCM2-205ENST00000472223 MGAT4CQ9UBM8 478 aa13.32□□□□□ -0.28
CCM2-205ENST00000472223 TRAV41A0A0B4J266 112 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 CEBPZOSA8MTT3 80 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 FAM90A26D6RGX4 464 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 CCSO14618 274 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 HOXA1P49639 335 aaPredicted RBP13.31□□□□□ -0.28
CCM2-205ENST00000472223 AKIRIN2Q53H80 203 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 Q6ZRM9 215 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 LFNGQ8NES3 379 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 TMEM158Q8WZ71 300 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 C2orf50Q96LR7 162 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 FAM103A1Q9BTL3 118 aaKnown RBP13.31□□□□□ -0.28
CCM2-205ENST00000472223 HIPK2Q9H2X6 1198 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 ZFP57Q9NU63 452 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 JMJD1CQ15652 2540 aa13.31□□□□□ -0.28
CCM2-205ENST00000472223 CLPSL1A2RUU4 121 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 SCGB1D2O95969 90 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 NKX2-1P43699 371 aaPredicted RBP13.3□□□□□ -0.28
CCM2-205ENST00000472223 PRCDQ00LT1 54 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 MRGPRG-AS1Q2M3A8 158 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 C10orf55Q5SWW7 151 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 Q6ZS46 218 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 PRIMA1Q86XR5 153 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 STPG2Q8N412 459 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 ZBTB8BQ8NAP8 495 aaPredicted RBP13.3□□□□□ -0.28
CCM2-205ENST00000472223 OR5M8Q8NGP6 311 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 NDUFA4L2Q9NRX3 87 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 ZNF580Q9UK33 172 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 RNF114Q9Y508 228 aa13.3□□□□□ -0.28
CCM2-205ENST00000472223 WSB1Q9Y6I7 421 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms