RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 HIST1H4AP62805 103 aaKnown RBP1.21□□□□□ -2.22
PTCD3-209ENST00000472044 CAV1Q03135 178 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 FABP9Q0Z7S8 132 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 CDKL4Q5MAI5 379 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 ZNF705AQ6ZN79 300 aaPredicted RBP1.21□□□□□ -2.22
PTCD3-209ENST00000472044 C10orf67Q8IYJ2 551 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 HSPB9Q9BQS6 159 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 NAA38Q9BRA0 125 aaKnown RBP1.21□□□□□ -2.22
PTCD3-209ENST00000472044 CHST6Q9GZX3 395 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 CYSTM1Q9H1C7 97 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 ANGPT4Q9Y264 503 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 DCCP43146 1447 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 STRCQ7RTU9 1775 aa1.21□□□□□ -2.22
PTCD3-209ENST00000472044 TRAV38-1A0A0B4J264 116 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 IGKV2-29A2NJV5 120 aaPredicted RBP1.2□□□□□ -2.22
PTCD3-209ENST00000472044 H3BT86 120 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 LEPROTO15243 131 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 ZNF737O75373 536 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 TFPTP0C1Z6 253 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 TMEM155Q4W5P6 130 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 SFXN4Q6P4A7 337 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 GID4Q8IVV7 300 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 RPP25LQ8N5L8 163 aaKnown RBP1.2□□□□□ -2.22
PTCD3-209ENST00000472044 TBC1D19Q8N5T2 526 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 PTH2Q96A98 100 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 MRPL32Q9BYC8 188 aaKnown RBP1.2□□□□□ -2.22
PTCD3-209ENST00000472044 LAMB2P55268 1798 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 MED13Q9UHV7 2174 aa1.2□□□□□ -2.22
PTCD3-209ENST00000472044 HEATR5BQ9P2D3 2071 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 A0A0D9SEW6 157 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 A0A1B0GV50 99 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 OR51F1A6NGY5 319 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 EVPLLA8MZ36 301 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 DCTN3O75935 186 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 CIAO1O76071 339 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 C1QAP02745 245 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 KRT7P08729 469 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 SRP19P09132 144 aaKnown RBP1.19□□□□□ -2.22
PTCD3-209ENST00000472044 GPX2P18283 190 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 CCR7P32248 378 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 MAGEA12P43365 314 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 HAAOP46952 286 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 CSN1S1P47710 185 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 RAB13P51153 203 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 C9orf64Q5T6V5 341 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 Q6ZSA8 131 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 DDI1Q8WTU0 396 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 OR51I1Q9H343 314 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 XPNPEP1Q9NQW7 623 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
PTCD3-209ENST00000472044 NOSIPQ9Y314 301 aaKnown RBP1.19□□□□□ -2.22
PTCD3-209ENST00000472044 EVC2Q86UK5 1308 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 FAM228BP0C875 321 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 ARL14EPLP0DKL9 152 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 FGF6P10767 208 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 MSNP26038 577 aaKnown RBP1.18□□□□□ -2.22
PTCD3-209ENST00000472044 AKR1C3P42330 323 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 AQP4P55087 323 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 OR4D2P58180 307 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 COQ5Q5HYK3 327 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 C1orf158Q8N1D5 194 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 OR1M1Q8NGA1 313 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 ANKRD7Q92527 254 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 NAT8Q9UHE5 227 aa1.18□□□□□ -2.22
PTCD3-209ENST00000472044 BAZ2BQ9UIF8 2168 aaKnown RBP1.17□□□□□ -2.22
PTCD3-209ENST00000472044 MEIS3P1A6NDR6 274 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 I3L521 148 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 PPBPP02775 128 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 OR5G3P0C626 314 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 DEFA4P12838 97 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 KCNE1P15382 129 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 S100A7P31151 101 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 EVX1P49640 407 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 FAM27BQ5VT28 67 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 GLT8D1Q68CQ7 371 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 SLC36A1Q7Z2H8 476 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 TMEM86AQ8N2M4 240 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 MBD3L1Q8WWY6 194 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 ACOT12Q8WYK0 555 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 OR8D2Q9GZM6 311 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 CST9LQ9H4G1 147 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 PAQR5Q9NXK6 330 aaPredicted RBP1.17□□□□□ -2.22
PTCD3-209ENST00000472044 FUT9Q9Y231 359 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 TIMM22Q9Y584 194 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 CCDC88AQ3V6T2 1871 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 SNAPC4Q5SXM2 1469 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 GLI3P10071 1580 aa1.17□□□□□ -2.22
PTCD3-209ENST00000472044 MYOFQ9NZM1 2061 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 TRAPPC2LH3BP13 241 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 TGOLN2O43493 480 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 NOS1APO75052 506 aaPredicted RBP1.16□□□□□ -2.22
PTCD3-209ENST00000472044 CALB1P05937 261 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 HIST3H3Q16695 136 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 C7orf65Q6ZTY9 151 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 ARL5BQ96KC2 179 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 CNBD2Q96M20 576 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 Q96M85 177 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 LSM5Q9Y4Y9 91 aaKnown RBP1.16□□□□□ -2.22
PTCD3-209ENST00000472044 KIF13BQ9NQT8 1826 aa1.16□□□□□ -2.22
PTCD3-209ENST00000472044 FBN3Q75N90 2809 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms