RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MACF1Q9UPN3 7388 aaKnown RBP-0.31□□□□□ -2.46
PRPF40A-207ENST00000471701 A0A1W2PP64 1363 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 EML6Q6ZMW3 1958 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 SLC22A1O15245 554 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 APOMO95445 188 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 NUP62P37198 522 aaPredicted RBP-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 RPS24P62847 133 aaKnown RBP-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 CLEC12BQ2HXU8 276 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 LRRC26Q2I0M4 334 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 SPERTQ8NA61 448 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 OR1M1Q8NGA1 313 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 SLC37A2Q8TED4 501 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 ERMAPQ96PL5 475 aaPredicted RBP-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 BBS2Q9BXC9 721 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 XAGE1AQ9HD64 81 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 RIMS2Q9UQ26 1411 aa-0.32□□□□□ -2.46
PRPF40A-207ENST00000471701 ZNF106Q9H2Y7 1883 aaKnown RBP-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 MAP3K19Q56UN5 1328 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 I3L521 148 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 NDUFS8O00217 210 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 NCR3O14931 201 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 FADS1O60427 444 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 METTL15P1P0C7V9 234 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 CD40LGP29965 261 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 CSN1S1P47710 185 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 RAB13P51153 203 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 FXYD2P54710 66 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 OR2T27Q8NH04 317 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 ANKRD36BP1Q96IX9 119 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 CYTH2Q99418 400 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 TIPINQ9BVW5 301 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 CXorf21Q9HAI6 301 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 NIT2Q9NQR4 276 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 ALPK3Q96L96 1907 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 ADGRB2O60241 1585 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 TNCP24821 2201 aa-0.33□□□□□ -2.46
PRPF40A-207ENST00000471701 MAST2Q6P0Q8 1798 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 A0A0D9SG42 100 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 A0A1B0GW54 56 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 C5orf49A4QMS7 147 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 C2orf70A6NJV1 201 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 IGHV3-7P01780 117 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 IL6P05231 212 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 CCDC172P0C7W6 258 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 SYT1P21579 422 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 KCNJ3P48549 501 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 EIF2B2P49770 351 aaKnown RBP-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 EFNA4P52798 201 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 HLA-DRB5Q30154 266 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 TBC1D19Q8N5T2 526 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 TMEM251Q8N6I4 163 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 ANKRD7Q92527 254 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 MSANTD3Q96H12 275 aa-0.34□□□□□ -2.46
PRPF40A-207ENST00000471701 LRP1Q07954 4544 aaKnown RBP-0.35□□□□□ -2.46
PRPF40A-207ENST00000471701 RALGAPA2Q2PPJ7 1873 aa-0.35□□□□□ -2.46
PRPF40A-207ENST00000471701 GGT3PA6NGU5 568 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 M0R2N4 97 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 HYPMO75409 117 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 ASAH2BP0C7U1 165 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 FKBP2P26885 142 aaKnown RBP-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 SYCP1Q15431 976 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 ZNHIT3Q15649 155 aaPredicted RBP-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 FAM45BPQ6NSW5 357 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 AAED1Q7RTV5 226 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 ATP6V1C2Q8NEY4 427 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 OR5AK3PQ8NH89 298 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 SLC50A1Q9BRV3 221 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 SLC22A4Q9H015 551 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 ANAPC10Q9UM13 185 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 DENND4CQ5VZ89 1909 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 CEP192Q8TEP8 1941 aa-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 ASH1LQ9NR48 2969 aaKnown RBP-0.35□□□□□ -2.47
PRPF40A-207ENST00000471701 FUOMA2VDF0 154 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 LST1O00453 97 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 ATP6V1G2O95670 118 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 KRT7P08729 469 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 RD3LP0DJH9 198 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 ZNF25P17030 456 aaPredicted RBP-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 S100A7P31151 101 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 CLDN12P56749 244 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 EBPQ15125 230 aaKnown RBP-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 TNFAIP8L3Q5GJ75 292 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 SBSNQ6UWP8 590 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 LCN15Q6UWW0 184 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 ZNF550Q7Z398 422 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 GRINAQ7Z429 371 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 UBL4BQ8N7F7 174 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 WFDC11Q8NEX6 87 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 OR7G1Q8NGA0 311 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 HAVCR2Q8TDQ0 301 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 PATE1Q8WXA2 126 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 BORCS5Q969J3 196 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 RBP7Q96R05 134 aa-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 LRPPRCP42704 1394 aaKnown RBP-0.36□□□□□ -2.47
PRPF40A-207ENST00000471701 OR5F1O95221 314 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 NFYAP23511 347 aaPredicted RBP-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 ZNF80P51504 273 aaPredicted RBP-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 KISS1Q15726 138 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 DNAL1Q4LDG9 190 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 ZNF826PQ6ZT77 177 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms