RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 POP5Q969H6 163 aaKnown RBP2.53□□□□□ -2
SCN3A-207ENST00000471697 ZNF501Q96CX3 271 aaPredicted RBP2.53□□□□□ -2
SCN3A-207ENST00000471697 OR2A7Q96R45 310 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 TRIB3Q96RU7 358 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 HIST1H2BLQ99880 126 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 MRPL32Q9BYC8 188 aaKnown RBP2.53□□□□□ -2
SCN3A-207ENST00000471697 CHST6Q9GZX3 395 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 POLR2J3Q9H1A7 115 aaKnown RBP2.53□□□□□ -2
SCN3A-207ENST00000471697 ATG5Q9H1Y0 275 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 CBLN4Q9NTU7 201 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 CCDC167Q9P0B6 97 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 PKIGQ9Y2B9 76 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 SBF1O95248 1867 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 FOCADQ5VW36 1801 aa2.53□□□□□ -2
SCN3A-207ENST00000471697 ABCC3O15438 1527 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 EFCAB6Q5THR3 1501 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 FANCMQ8IYD8 2048 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 IQSEC2Q5JU85 1478 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 PLIN4Q96Q06 1357 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 A0A087WW49 117 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 FAM236DA0A1B0GTK5 79 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 GGT3PA6NGU5 568 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 CD300LBA8K4G0 201 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 BBIP1A8MTZ0 92 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 UPK2O00526 184 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 NTN3O00634 580 aaPredicted RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 FFAR1O14842 300 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 CD5LO43866 347 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 ARL6IP5O75915 188 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 TNFP01375 233 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 IGHMP01871 453 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 FAM236CP0DP71 79 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 LAMP1P11279 417 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 FABP4P15090 132 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 NDUFV3P56181 108 aaKnown RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 TAS2R46P59540 309 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 RPS24P62847 133 aaKnown RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 AKR1C1Q04828 323 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 LAMTOR4Q0VGL1 99 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 PNOCQ13519 176 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 C1DQ13901 141 aaKnown RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 PAFAH1B3Q15102 231 aaKnown RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 GSG1Q2KHT4 349 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 Q499Y3 187 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 FAM201AQ5SY85 155 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 GLYATL3Q5SZD4 288 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 MORN3Q6PF18 240 aaPredicted RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 SBSNQ6UWP8 590 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 ALKAL2Q6UX46 152 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 HEPN1Q6WQI6 88 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 VN1R4Q7Z5H5 301 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 KCNRGQ8N5I3 272 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 TEX29Q8N6K0 151 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 STPG4Q8N801 248 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 NUP37Q8NFH4 326 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 OR11H7Q8NGC8 314 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 OR1J4Q8NGS1 313 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 OR8S1Q8NH09 359 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 OR9G1Q8NH87 305 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 OR5AK2Q8NH90 309 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 LRRC29Q8WV35 223 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 ZNF689Q96CS4 500 aaPredicted RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 STARD4Q96DR4 205 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 ADAT3Q96EY9 351 aaPredicted RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 PRAC1Q96KF2 57 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 SPACA5Q96QH8 159 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 PKMYT1Q99640 499 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 PRSS27Q9BQR3 290 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 VAMP8Q9BV40 100 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 TMEM191AQ9H0A3 160 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 SLC25A31Q9H0C2 315 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 DEFB127Q9H1M4 99 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 RABAC1Q9UI14 185 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 KLF13Q9Y2Y9 288 aaPredicted RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 NOP16Q9Y3C1 178 aaKnown RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 TARBP1Q13395 1621 aaKnown RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 SYNJ1O43426 1573 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 URB2Q14146 1524 aaKnown RBP2.52□□□□□ -2.01
SCN3A-207ENST00000471697 PRXQ9BXM0 1461 aa2.52□□□□□ -2.01
SCN3A-207ENST00000471697 ANKARQ7Z5J8 1434 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 THSD7AQ9UPZ6 1657 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 TRIP12Q14669 1992 aaPredicted RBP2.51□□□□□ -2.01
SCN3A-207ENST00000471697 SCN9AQ15858 1988 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 CC2D2AQ9P2K1 1620 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 IGHV4-30-2A0A087WSY4 118 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 LY6G6EA0A0G2JKS1 128 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 WI2-2373I1.2A0A1W2PRP0 233 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 DHRS12A0PJE2 317 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 PLAC8L1A1L4L8 177 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 B4DEV8 164 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 SHISA9B4DS77 424 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 MCRIP1C9JLW8 97 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 PRAC2D3DTV9 90 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 H0YJW9 148 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 RER1O15258 196 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 SLC37A4O43826 429 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 CFDP00746 253 aaPredicted RBP2.51□□□□□ -2.01
SCN3A-207ENST00000471697 CTSDP07339 412 aaPredicted RBP2.51□□□□□ -2.01
SCN3A-207ENST00000471697 SEC11BP0C7V7 166 aa2.51□□□□□ -2.01
SCN3A-207ENST00000471697 ZNF728P0DKX0 622 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms