RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 C10orf55Q5SWW7 151 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 LAIR2Q6ISS4 152 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 BTNL8Q6UX41 500 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 CLEC19AQ6UXS0 136 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 KIR2DL5AQ8N109 375 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 OR2C3Q8N628 320 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 STPG3Q8N7X2 389 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 KIR2DL5BQ8NHK3 375 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 TMEM167AQ8TBQ9 72 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 CACNG8Q8WXS5 425 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 CCDC140Q96MF4 163 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 GFI1Q99684 422 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 SPAG8Q99932 426 aaPredicted RBP6.81□□□□□ -1.32
CPSF4-211ENST00000471455 C6orf62Q9GZU0 229 aaPredicted RBP6.81□□□□□ -1.32
CPSF4-211ENST00000471455 ACOT13Q9NPJ3 140 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 THYN1Q9P016 225 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 MRPL27Q9P0M9 148 aaKnown RBP6.81□□□□□ -1.32
CPSF4-211ENST00000471455 MLXQ9UH92 298 aa6.81□□□□□ -1.32
CPSF4-211ENST00000471455 LSM2Q9Y333 95 aaKnown RBP6.81□□□□□ -1.32
CPSF4-211ENST00000471455 RBMX2Q9Y388 322 aaKnown RBP6.81□□□□□ -1.32
CPSF4-211ENST00000471455 HMX3A6NHT5 357 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 TEX22C9J3V5 150 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 EBAG9O00559 213 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 IGHV3-23P01764 117 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 ZNF735P0CB33 412 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 GNB3P16520 340 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 RPL8P62917 257 aaKnown RBP6.8□□□□□ -1.32
CPSF4-211ENST00000471455 MLLT11Q13015 90 aaPredicted RBP6.8□□□□□ -1.32
CPSF4-211ENST00000471455 DEFB135Q30KP9 77 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 OR2B11Q5JQS5 317 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 LAMTOR1Q6IAA8 161 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 TMEM91Q6ZNR0 172 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 OR4A5Q8NH83 315 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 TCTEX1D2Q8WW35 142 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 MAFIPQ8WZ33 124 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 CCDC90BQ9GZT6 254 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 C5orf66Q9H5L9 145 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 KCNK7Q9Y2U2 307 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 TPRKBQ9Y3C4 175 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 OR2W1Q9Y3N9 320 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 DMRT1Q9Y5R6 373 aa6.8□□□□□ -1.32
CPSF4-211ENST00000471455 OR4C46A6NHA9 309 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 SCGNO76038 276 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 HLA-DQB1P01920 261 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 CTRB1P17538 263 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 EDN2P20800 178 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 CRHBPP24387 322 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 MYL9P24844 172 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 RPS25P62851 125 aaKnown RBP6.79□□□□□ -1.32
CPSF4-211ENST00000471455 KLK9Q2XQG4 91 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 ZNF585BQ52M93 769 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 HES5Q5TA89 166 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 LGALS9CQ6DKI2 356 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 CTRB2Q6GPI1 263 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 PLET1Q6UQ28 207 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 PUSL1Q8N0Z8 303 aaKnown RBP6.79□□□□□ -1.32
CPSF4-211ENST00000471455 SRSF8Q9BRL6 282 aaKnown RBP6.79□□□□□ -1.32
CPSF4-211ENST00000471455 MFFQ9GZY8 342 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 DCSTAMPQ9H295 470 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 KLK9Q9UKQ9 250 aa6.79□□□□□ -1.32
CPSF4-211ENST00000471455 IGLV11-55A0A075B6I3 123 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 IFITM5A6NNB3 132 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 RAB27BO00194 218 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 TSPAN4O14817 238 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 RGS10O43665 173 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 CLEC3BP05452 202 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 IL6RP08887 468 aaPredicted RBP6.78□□□□□ -1.32
CPSF4-211ENST00000471455 C8orf88P0DMB2 117 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 AREGP15514 252 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 HLA-GP17693 338 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 GPR183P32249 361 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 IRF3Q14653 427 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 OGFRL1Q5TC84 451 aaPredicted RBP6.78□□□□□ -1.32
CPSF4-211ENST00000471455 THOC7Q6I9Y2 204 aaKnown RBP6.78□□□□□ -1.32
CPSF4-211ENST00000471455 CNIH2Q6PI25 160 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 ZNF66Q6ZN08 573 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 HSD17B13Q7Z5P4 300 aaPredicted RBP6.78□□□□□ -1.32
CPSF4-211ENST00000471455 VKORC1L1Q8N0U8 176 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
CPSF4-211ENST00000471455 RNF183Q96D59 192 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 HRASLSQ9HDD0 168 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 DAZ1Q9NQZ3 744 aaKnown RBP6.78□□□□□ -1.32
CPSF4-211ENST00000471455 BET1LQ9NYM9 111 aa6.78□□□□□ -1.32
CPSF4-211ENST00000471455 TRAV1-2A0A0B4J238 106 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 MFSD2BA6NFX1 497 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 J3QRK9 145 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 CASQ2O14958 399 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-211ENST00000471455 IFNA4P05014 189 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 FGF2P09038 288 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 NFYAP23511 347 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-211ENST00000471455 PTBP1P26599 531 aaKnown RBP eCLIP6.77□□□□□ -1.33
CPSF4-211ENST00000471455 CMC4P56277 68 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-211ENST00000471455 TCTAP57738 103 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 ARPC4P59998 168 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 FABP5Q01469 135 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 CATR1Q13166 79 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 MSMO1Q15800 293 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 RPP25LQ8N5L8 163 aaKnown RBP6.77□□□□□ -1.33
CPSF4-211ENST00000471455 VN1R17PQ8TDU5 208 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 TMEM190Q8WZ59 177 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms